Analysis of interatomic Contacts of Structural Units in PDB entry:
1UXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UXF entry

There is 1 chain in PDB entry 1UXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7PHE 923
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 1UXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 18Right-handed 310
Helix 2
2
A
25 31Right-handed alpha
Helix 3
3
A
36 44Right-handed alpha
Helix 4
4
A
120 126Right-handed alpha
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There are 4 sheets in PDB entry 1UXF. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
110 117anti-parallel
Strand 3
A
132 138anti-parallel
Strand 4
A
72 75parallel
Strand 5
A
78 79anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
62 63anti-parallel
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There are 62 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 157first strand
Strand 2
A
162 172anti-parallel
Strand 3
A
179 190anti-parallel
Strand 4
A
218 229anti-parallel
Strand 5
A
235 246anti-parallel
Strand 6
A
272 288anti-parallel
Strand 7
A
294 308anti-parallel
Strand 8
A
443 462anti-parallel
Strand 9
A
465 484anti-parallel
Strand 10
A
544 561anti-parallel
Strand 11
A
565 581anti-parallel
Strand 12
A
624 640anti-parallel
Strand 13
A
646 657anti-parallel
Strand 14
A
682 696anti-parallel
Strand 15
A
699 712anti-parallel
Strand 16
A
746 760anti-parallel
Strand 17
A
769 781anti-parallel
Strand 18
A
795 807anti-parallel
Strand 19
A
162 172first strand
Strand 20
A
148 157anti-parallel
Strand 21
A
179 190first strand
Strand 22
A
162 172anti-parallel
Strand 23
A
218 229first strand
Strand 24
A
179 190anti-parallel
Strand 25
A
235 246first strand
Strand 26
A
218 229anti-parallel
Strand 27
A
272 308first strand
Strand 28
A
235 246anti-parallel
Strand 29
A
294 308first strand
Strand 30
A
272 288anti-parallel
Strand 31
A
443 462first strand
Strand 32
A
294 308anti-parallel
Strand 33
A
465 484first strand
Strand 34
A
443 462anti-parallel
Strand 35
A
544 561first strand
Strand 36
A
465 484anti-parallel
Strand 37
A
565 581first strand
Strand 38
A
544 561anti-parallel
Strand 39
A
624 640first strand
Strand 40
A
565 581anti-parallel
Strand 41
A
646 657first strand
Strand 42
A
624 640anti-parallel
Strand 43
A
682 696first strand
Strand 44
A
646 657anti-parallel
Strand 45
A
699 712first strand
Strand 46
A
682 696anti-parallel
Strand 47
A
746 760first strand
Strand 48
A
699 712anti-parallel
Strand 49
A
769 781first strand
Strand 50
A
746 760anti-parallel
Strand 51
A
787 789first strand
Strand 52
A
769 781anti-parallel
Strand 53
A
795 807anti-parallel
Strand 54
A
846 860first strand
Strand 55
A
810 824anti-parallel
Strand 56
A
865 873first strand
Strand 57
A
846 860anti-parallel
Strand 58
A
914 923first strand
Strand 59
A
149 157anti-parallel
Strand 60
A
823 824first strand
Strand 61
A
846 847anti-parallel
Strand 62

0 0first strand
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

255 0first strand
Strand 2

**** 0first strand
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