Analysis of interatomic Contacts of Structural Units in PDB entry:
1UYV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1UYV entry

There are 3 chains in PDB entry 1UYV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1482GLN 2196
B
 PRO 1482LYS 2190
C
 TRP 1492LYS 2201
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 1UYV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1489 1494Right-handed alpha
Helix 2
2
A
1495 1503Right-handed alpha
Helix 3
3
A
1507 1509Right-handed 310
Helix 4
4
A
1510 1527Right-handed alpha
Helix 5
5
A
1533 1535Right-handed 310
Helix 6
6
A
1591 1595Right-handed 310
Helix 7
7
A
1597 1615Right-handed alpha
Helix 8
8
A
1705 1722Right-handed alpha
Helix 9
9
A
1734 1743Right-handed alpha
Helix 10
10
A
1758 1767Right-handed alpha
Helix 11
11
A
1774 1779Right-handed alpha
Helix 12
12
A
1779 1787Right-handed alpha
Helix 13
13
A
1795 1808Right-handed alpha
Helix 14
14
A
1842 1849Right-handed alpha
Helix 15
15
A
1925 1941Right-handed alpha
Helix 16
16
A
1959 1965Right-handed alpha
Helix 17
17
A
1966 1981Right-handed alpha
Helix 18
18
A
1996 2004Right-handed alpha
Helix 19
19
A
2005 2009Right-handed 310
Helix 20
20
A
2099 2105Right-handed alpha
Helix 21
21
A
2114 2143Right-handed alpha
Helix 22
22
A
2147 2157Right-handed alpha
Helix 23
23
A
2167 2178Right-handed alpha
Helix 24
24
A
2178 2187Right-handed alpha
Helix 25
25
A
2188 2193Right-handed 310
Helix 26
26
B
1489 1494Right-handed alpha
Helix 27
27
B
1494 1503Right-handed alpha
Helix 28
28
B
1507 1509Right-handed 310
Helix 29
29
B
1510 1527Right-handed alpha
Helix 30
30
B
1533 1535Right-handed 310
Helix 31
31
B
1591 1595Right-handed 310
Helix 32
32
B
1597 1615Right-handed alpha
Helix 33
33
B
1703 1722Right-handed alpha
Helix 34
34
B
1734 1743Right-handed alpha
Helix 35
35
B
1758 1767Right-handed alpha
Helix 36
36
B
1774 1779Right-handed alpha
Helix 37
37
B
1779 1787Right-handed alpha
Helix 38
38
B
1795 1808Right-handed alpha
Helix 39
39
B
1842 1849Right-handed alpha
Helix 40
40
B
1925 1941Right-handed alpha
Helix 41
41
B
1959 1965Right-handed alpha
Helix 42
42
B
1966 1981Right-handed alpha
Helix 43
43
B
1996 2001Right-handed alpha
Helix 44
44
B
2004 2009Right-handed 310
Helix 45
45
B
2114 2116Right-handed 310
Helix 46
46
B
2117 2143Right-handed alpha
Helix 47
47
B
2147 2157Right-handed alpha
Helix 48
48
B
2167 2178Right-handed alpha
Helix 49
49
B
2178 2186Right-handed alpha
Helix 50
50
C
1493 1503Right-handed alpha
Helix 51
51
C
1507 1509Right-handed 310
Helix 52
52
C
1510 1527Right-handed alpha
Helix 53
53
C
1591 1595Right-handed 310
Helix 54
54
C
1597 1615Right-handed alpha
Helix 55
55
C
1707 1722Right-handed alpha
Helix 56
56
C
1734 1743Right-handed alpha
Helix 57
57
C
1758 1767Right-handed alpha
Helix 58
58
C
1774 1779Right-handed alpha
Helix 59
59
C
1779 1787Right-handed alpha
Helix 60
60
C
1795 1808Right-handed alpha
Helix 61
61
C
1842 1849Right-handed alpha
Helix 62
62
C
1925 1941Right-handed alpha
Helix 63
63
C
1959 1965Right-handed alpha
Helix 64
64
C
1966 1981Right-handed alpha
Helix 65
65
C
1997 2001Right-handed alpha
Helix 66
66
C
2004 2009Right-handed 310
Helix 67
67
C
2099 2107Right-handed alpha
Helix 68
68
C
2114 2116Right-handed 310
Helix 69
69
C
2117 2141Right-handed alpha
Helix 70
70
C
2147 2157Right-handed alpha
Helix 71
71
C
2167 2178Right-handed alpha
Helix 72
72
C
2178 2190Right-handed alpha
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There are 20 sheets in PDB entry 1UYV. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, BA, BB, BC, BD, BE, BF, CA, CB, CC, CD, CE, CF, CG,

There are 8 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1550 1553first strand
Strand 2
A
1537 1544anti-parallel
Strand 3
A
1564 1571anti-parallel
Strand 4
A
1580 1587anti-parallel
Strand 5
A
1618 1622parallel
Strand 6
A
1724 1728parallel
Strand 7
A
1745 1749parallel
Strand 8
A
1791 1793parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1732 1733first strand
Strand 2
A
1754 1755parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1850 1851first strand
Strand 2
A
1856 1857anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1867 1869first strand
Strand 2
A
1877 1884anti-parallel
Strand 3
A
1887 1894anti-parallel
Strand 4
A
1947 1950parallel
Strand 5
A
1985 1989parallel
Strand 6
A
2012 2017parallel
Strand 7
A
2111 2113parallel
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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1899 1903first strand
Strand 2
A
1915 1919anti-parallel
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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1923 1924first strand
Strand 2
A
1955 1956parallel
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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1994 1995first strand
Strand 2
A
2021 2022parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1550 1553first strand
Strand 2
B
1537 1544anti-parallel
Strand 3
B
1564 1571anti-parallel
Strand 4
B
1580 1587anti-parallel
Strand 5
B
1618 1622parallel
Strand 6
B
1724 1728parallel
Strand 7
B
1745 1749parallel
Strand 8
B
1791 1793parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1732 1733first strand
Strand 2
B
1754 1755parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1850 1851first strand
Strand 2
B
1856 1857anti-parallel
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There are 7 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1867 1869first strand
Strand 2
B
1877 1884anti-parallel
Strand 3
B
1887 1894anti-parallel
Strand 4
B
1947 1949parallel
Strand 5
B
1985 1989parallel
Strand 6
B
2014 2017parallel
Strand 7
B
2111 2113parallel
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There are 2 strands in BE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1899 1903first strand
Strand 2
B
1915 1919anti-parallel
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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1923 1924first strand
Strand 2
B
1955 1956parallel
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There are 8 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1550 1553first strand
Strand 2
C
1537 1544anti-parallel
Strand 3
C
1564 1573anti-parallel
Strand 4
C
1576 1587anti-parallel
Strand 5
C
1618 1622parallel
Strand 6
C
1724 1728parallel
Strand 7
C
1745 1749parallel
Strand 8
C
1791 1793parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1732 1733first strand
Strand 2
C
1754 1755parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1850 1852first strand
Strand 2
C
1855 1857anti-parallel
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There are 7 strands in CD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1867 1869first strand
Strand 2
C
1877 1884anti-parallel
Strand 3
C
1887 1894anti-parallel
Strand 4
C
1947 1949parallel
Strand 5
C
1985 1989parallel
Strand 6
C
2012 2017parallel
Strand 7
C
2111 2113parallel
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There are 2 strands in CE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1899 1903first strand
Strand 2
C
1915 1919anti-parallel
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There are 2 strands in CF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1923 1924first strand
Strand 2
C
1955 1956parallel
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There are 2 strands in CG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1995 1996first strand
Strand 2
C
2022 2023parallel
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