Analysis of interatomic Contacts of Structural Units in PDB entry:
1UZG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1UZG entry

There are 2 chains in PDB entry 1UZG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 392
B	MET 1	LYS 392

There are 5 helices in PDB entry 1UZG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	82	87	Right-handed 310
Helix 2	2	A	207	214	Right-handed alpha
Helix 3	4	A	254	262	Right-handed alpha
Helix 4	6	B	207	214	Right-handed alpha
Helix 5	8	B	254	262	Right-handed alpha

There are 18 sheets in PDB entry 1UZG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	30	35	parallel
Strand 3	A	38	47	anti-parallel
Strand 4	A	136	143	anti-parallel
Strand 5	A	158	163	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	25	first strand
Strand 2	A	281	286	anti-parallel
Strand 3	A	177	182	anti-parallel
Strand 4	A	168	173	anti-parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	57	first strand
Strand 2	A	126	129	anti-parallel
Strand 3	A	194	199	anti-parallel
Strand 4	A	202	207	anti-parallel
Strand 5	A	267	268	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	63	71	first strand
Strand 2	A	109	121	anti-parallel
Strand 3	A	90	99	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	237	239	first strand
Strand 2	A	247	249	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	299	first strand
Strand 2	A	331	332	parallel
Strand 3	A	355	356	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	304	312	first strand
Strand 2	A	318	324	anti-parallel
Strand 3	A	363	368	anti-parallel
Strand 4	A	348	349	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	335	338	first strand
Strand 2	A	373	378	anti-parallel
Strand 3	A	385	390	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	10	12	first strand
Strand 2	B	31	35	parallel
Strand 3	B	38	47	anti-parallel
Strand 4	B	136	143	anti-parallel
Strand 5	B	159	163	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	22	first strand
Strand 2	B	284	286	anti-parallel
Strand 3	B	177	182	anti-parallel
Strand 4	B	168	173	anti-parallel

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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	57	first strand
Strand 2	B	127	129	anti-parallel
Strand 3	B	194	199	anti-parallel
Strand 4	B	206	207	anti-parallel

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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	57	first strand
Strand 2	B	127	129	anti-parallel
Strand 3	B	194	199	anti-parallel
Strand 4	B	202	203	anti-parallel

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There are 3 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	63	71	first strand
Strand 2	B	113	121	anti-parallel
Strand 3	B	90	95	anti-parallel

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There are 2 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	99	first strand
Strand 2	B	109	110	anti-parallel

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There are 2 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	239	first strand
Strand 2	B	247	250	anti-parallel

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There are 3 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	299	first strand
Strand 2	B	331	332	parallel
Strand 3	B	355	356	anti-parallel

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There are 4 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	304	312	first strand
Strand 2	B	318	324	anti-parallel
Strand 3	B	363	368	anti-parallel
Strand 4	B	348	349	anti-parallel

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There are 3 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	335	338	first strand
Strand 2	B	372	378	anti-parallel
Strand 3	B	385	391	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1UZG

Analysis of interatomic Contacts of Structural Units in PDB entry:
1UZG