Analysis of interatomic Contacts of Structural Units in PDB entry:
1V03


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V03 entry

There is 1 chain in PDB entry 1V03 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 11ALA 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1V03. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 19Right-handed 310
Helix 2
2
A
21 25Right-handed 310
Helix 3
3
A
36 41Right-handed alpha
Helix 4
4
A
52 61Right-handed alpha
Helix 5
5
A
62 65Right-handed 310
Helix 6
6
A
76 92Right-handed alpha
Helix 7
7
A
101 106Right-handed alpha
Helix 8
8
A
110 114Right-handed 310
Helix 9
9
A
116 133Right-handed alpha
Helix 10
10
A
147 155Right-handed alpha
Helix 11
11
A
156 160Right-handed 310
Helix 12
12
A
161 178Right-handed alpha
Helix 13
13
A
189 198Right-handed alpha
Helix 14
14
A
223 247Right-handed alpha
Helix 15
15
A
269 294Right-handed alpha
Helix 16
16
A
297 305Right-handed alpha
Helix 17
17
A
306 308Right-handed 310
Helix 18
18
A
312 320Right-handed alpha
Helix 19
19
A
349 354Right-handed 310
Helix 20
20
A
381 394Right-handed alpha
Helix 21
21
A
416 422Right-handed alpha
Helix 22
22
A
423 443Right-handed alpha
Helix 23
23
A
460 464Right-handed 310
Helix 24
24
A
476 479Right-handed 310
Helix 25
25
A
485 495Right-handed alpha
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There are 4 sheets in PDB entry 1V03. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
447 453parallel
Strand 3
A
400 404parallel
Strand 4
A
325 329parallel
Strand 5
A
253 259parallel
Strand 6
A
183 188parallel
Strand 7
A
136 142parallel
Strand 8
A
95 99parallel
Strand 9
A
30 34parallel
Strand 10
A
30 34first strand
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 265first strand
Strand 2
A
333 338parallel
Strand 3
A
356 359anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 410first strand
Strand 2
A
467 468anti-parallel
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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 474first strand
Strand 2
A
482 484anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il