Analysis of interatomic Contacts of Structural Units in PDB entry:
1V33


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V33 entry

There is 1 chain in PDB entry 1V33 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1THR 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1V33. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 18Right-handed alpha
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
25 30Right-handed alpha
Helix 4
4
A
31 35Right-handed 310
Helix 5
5
A
55 67Right-handed alpha
Helix 6
6
A
99 101Right-handed 310
Helix 7
7
A
114 135Right-handed alpha
Helix 8
8
A
156 161Right-handed alpha
Helix 9
9
A
163 175Right-handed alpha
Helix 10
10
A
181 192Right-handed alpha
Helix 11
11
A
193 198Right-handed 310
Helix 12
12
A
201 215Right-handed alpha
Helix 13
13
A
218 225Right-handed alpha
Helix 14
14
A
228 238Right-handed alpha
Helix 15
15
A
238 246Right-handed alpha
Helix 16
16
A
251 255Right-handed 310
Helix 17
17
A
259 277Right-handed alpha
Helix 18
18
A
280 286Right-handed alpha
Helix 19
19
A
311 318Right-handed alpha
Helix 20
20
A
319 324Right-handed alpha
Helix 21
21
A
326 328Right-handed 310
Helix 22
22
A
329 343Right-handed alpha
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There are 4 sheets in PDB entry 1V33. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
37 40anti-parallel
Strand 3
A
70 74anti-parallel
Strand 4
A
290 292anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
85 90anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
149 154anti-parallel
Strand 3
A
141 145anti-parallel
Strand 4
A
307 309anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
A
303 304anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il