Analysis of interatomic Contacts of Structural Units in PDB entry:
1V4V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V4V entry

There are 2 chains in PDB entry 1V4V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 4PRO 376
B
 MSE 5PRO 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1V4V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 30Right-handed alpha
Helix 2
2
A
44 54Right-handed alpha
Helix 3
3
A
71 90Right-handed alpha
Helix 4
4
A
101 114Right-handed alpha
Helix 5
5
A
135 147Right-handed alpha
Helix 6
6
A
154 163Right-handed alpha
Helix 7
7
A
167 169Right-handed 310
Helix 8
8
A
176 189Right-handed alpha
Helix 9
9
A
207 212Right-handed 310
Helix 10
10
A
213 228Right-handed alpha
Helix 11
11
A
240 252Right-handed alpha
Helix 12
12
A
264 274Right-handed alpha
Helix 13
13
A
282 292Right-handed alpha
Helix 14
14
A
305 312Right-handed alpha
Helix 15
15
A
320 333Right-handed alpha
Helix 16
16
A
334 344Right-handed alpha
Helix 17
17
A
352 365Right-handed alpha
Helix 18
18
B
14 30Right-handed alpha
Helix 19
19
B
44 54Right-handed alpha
Helix 20
20
B
71 90Right-handed alpha
Helix 21
21
B
101 114Right-handed alpha
Helix 22
22
B
135 147Right-handed alpha
Helix 23
23
B
154 164Right-handed alpha
Helix 24
24
B
167 169Right-handed 310
Helix 25
25
B
176 189Right-handed alpha
Helix 26
26
B
212 228Right-handed alpha
Helix 27
27
B
240 252Right-handed alpha
Helix 28
28
B
264 274Right-handed alpha
Helix 29
29
B
282 293Right-handed alpha
Helix 30
30
B
320 333Right-handed alpha
Helix 31
31
B
337 343Right-handed alpha
Helix 32
32
B
352 365Right-handed alpha
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There are 4 sheets in PDB entry 1V4V. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
34 40parallel
Strand 3
A
6 12parallel
Strand 4
A
94 98parallel
Strand 5
A
118 121parallel
Strand 6
A
149 152parallel
Strand 7
A
171 173parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 260first strand
Strand 2
A
232 236parallel
Strand 3
A
200 203parallel
Strand 4
A
275 280parallel
Strand 5
A
296 298parallel
Strand 6
A
314 316parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 62first strand
Strand 2
B
34 40parallel
Strand 3
B
6 12parallel
Strand 4
B
94 98parallel
Strand 5
B
118 121parallel
Strand 6
B
149 152parallel
Strand 7
B
171 173parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 260first strand
Strand 2
B
232 236parallel
Strand 3
B
200 204parallel
Strand 4
B
275 280parallel
Strand 5
B
296 298parallel
Strand 6
B
314 316parallel
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