Analysis of interatomic Contacts of Structural Units in PDB entry:
1V51


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V51 entry

There is 1 chain in PDB entry 1V51 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 7ARG 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1V51. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
72 77Right-handed alpha
Helix 2
2
A
80 85Right-handed alpha
Helix 3
3
A
111 115Right-handed 310
Helix 4
4
A
125 136Right-handed alpha
Helix 5
5
A
148 156Right-handed alpha
Helix 6
6
A
164 182Right-handed alpha
Helix 7
7
A
192 196Right-handed 310
Helix 8
8
A
199 207Right-handed alpha
Helix 9
9
A
208 214Right-handed alpha
Helix 10
10
A
227 243Right-handed alpha
Helix 11
11
A
255 259Right-handed 310
Helix 12
12
A
261 274Right-handed alpha
Helix 13
13
A
297 301Right-handed 310
Helix 14
14
A
311 315Right-handed 310
Helix 15
15
A
318 326Right-handed alpha
Helix 16
16
A
329 338Right-handed alpha
Helix 17
17
A
348 358Right-handed alpha
Helix 18
18
A
376 387Right-handed alpha
Helix 19
19
A
397 404Right-handed alpha
Helix 20
20
A
406 414Right-handed alpha
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There are 5 sheets in PDB entry 1V51. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
29 33anti-parallel
Strand 3
A
10 13anti-parallel
Strand 4
A
51 53parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 27first strand
Strand 2
A
16 17anti-parallel
Strand 3
A
58 61parallel
Strand 4
A
429 432anti-parallel
Strand 5
A
453 458anti-parallel
Strand 6
A
461 465anti-parallel
Strand 7
A
468 469anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
88 93parallel
Strand 3
A
141 147parallel
Strand 4
A
185 188parallel
Strand 5
A
216 219parallel
Strand 6
A
246 248parallel
Strand 7
A
278 282parallel
Strand 8
A
361 363parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 104first strand
Strand 2
A
122 123anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
A
340 344anti-parallel
Strand 3
A
303 308anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il