Analysis of interatomic Contacts of Structural Units in PDB entry:
1V58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V58 entry

There are 2 chains in PDB entry 1V58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2ASN 230
B
 GLU 2ASN 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1V58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 12Right-handed alpha
Helix 2
2
A
62 72Right-handed alpha
Helix 3
3
A
74 76Right-handed 310
Helix 4
4
A
77 86Right-handed alpha
Helix 5
5
A
109 125Right-handed alpha
Helix 6
6
A
141 152Right-handed alpha
Helix 7
7
A
154 165Right-handed alpha
Helix 8
8
A
178 196Right-handed alpha
Helix 9
9
A
220 228Right-handed alpha
Helix 10
10
B
4 12Right-handed alpha
Helix 11
11
B
62 72Right-handed alpha
Helix 12
12
B
73 86Right-handed alpha
Helix 13
13
B
109 124Right-handed alpha
Helix 14
14
B
141 152Right-handed alpha
Helix 15
15
B
154 165Right-handed alpha
Helix 16
16
B
178 195Right-handed alpha
Helix 17
17
B
220 228Right-handed alpha
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There are 4 sheets in PDB entry 1V58. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 22first strand
Strand 2
A
28 34anti-parallel
Strand 3
A
37 43anti-parallel
Strand 4
A
50 52anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 92first strand
Strand 2
A
128 134anti-parallel
Strand 3
A
99 105parallel
Strand 4
A
202 207anti-parallel
Strand 5
A
211 216anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 22first strand
Strand 2
B
28 34anti-parallel
Strand 3
B
37 43anti-parallel
Strand 4
B
50 52anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 92first strand
Strand 2
B
128 134anti-parallel
Strand 3
B
99 105parallel
Strand 4
B
202 206anti-parallel
Strand 5
B
212 216anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il