Analysis of interatomic Contacts of Structural Units in PDB entry:
1V59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V59 entry

There are 2 chains in PDB entry 1V59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1CYS 478
B
 THR 1CYS 478
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 1V59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
41 48Right-handed alpha
Helix 3
3
A
48 68Right-handed alpha
Helix 4
4
A
69 72Right-handed 310
Helix 5
5
A
83 109Right-handed alpha
Helix 6
6
A
172 177Right-handed alpha
Helix 7
7
A
192 205Right-handed alpha
Helix 8
8
A
223 237Right-handed alpha
Helix 9
9
A
324 327Right-handed 310
Helix 10
10
A
332 350Right-handed alpha
Helix 11
11
A
375 382Right-handed alpha
Helix 12
12
A
396 402Right-handed alpha
Helix 13
13
A
429 443Right-handed alpha
Helix 14
14
A
446 452Right-handed alpha
Helix 15
15
A
461 473Right-handed alpha
Helix 16
16
B
14 27Right-handed alpha
Helix 17
17
B
41 48Right-handed alpha
Helix 18
18
B
48 68Right-handed alpha
Helix 19
19
B
69 72Right-handed 310
Helix 20
20
B
83 109Right-handed alpha
Helix 21
21
B
172 177Right-handed alpha
Helix 22
22
B
192 205Right-handed alpha
Helix 23
23
B
223 237Right-handed alpha
Helix 24
24
B
293 298Right-handed alpha
Helix 25
25
B
324 327Right-handed 310
Helix 26
26
B
332 350Right-handed alpha
Helix 27
27
B
375 381Right-handed alpha
Helix 28
28
B
396 402Right-handed alpha
Helix 29
29
B
429 444Right-handed alpha
Helix 30
30
B
446 452Right-handed alpha
Helix 31
31
B
460 473Right-handed alpha
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There are 14 sheets in PDB entry 1V59. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
31 35parallel
Strand 3
A
2 11parallel
Strand 4
A
142 151parallel
Strand 5
A
125 129anti-parallel
Strand 6
A
117 120anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 115first strand
Strand 2
A
31 35parallel
Strand 3
A
2 11parallel
Strand 4
A
142 151parallel
Strand 5
A
320 322parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
B
80 82anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 82first strand
Strand 2
B
74 76anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
285 287anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 171first strand
Strand 2
A
278 281parallel
Strand 3
A
185 189parallel
Strand 4
A
208 212parallel
Strand 5
A
240 242parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
245 253first strand
Strand 2
A
258 265anti-parallel
Strand 3
A
270 276anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
361 363first strand
Strand 2
A
368 373anti-parallel
Strand 3
A
420 427anti-parallel
Strand 4
A
408 414anti-parallel
Strand 5
A
386 392anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 115first strand
Strand 2
B
31 35parallel
Strand 3
B
2 11parallel
Strand 4
B
142 151parallel
Strand 5
B
125 129anti-parallel
Strand 6
B
117 120anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 115first strand
Strand 2
B
31 35parallel
Strand 3
B
2 11parallel
Strand 4
B
142 151parallel
Strand 5
B
320 322parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
155 157first strand
Strand 2
B
285 287anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
278 281parallel
Strand 3
B
185 189parallel
Strand 4
B
208 212parallel
Strand 5
B
240 242parallel
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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
245 253first strand
Strand 2
B
258 265anti-parallel
Strand 3
B
271 276anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
361 363first strand
Strand 2
B
368 373anti-parallel
Strand 3
B
420 427anti-parallel
Strand 4
B
408 414anti-parallel
Strand 5
B
386 392anti-parallel
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