Analysis of interatomic Contacts of Structural Units in PDB entry:
1V5B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V5B entry

There are 8 chains in PDB entry 1V5B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 356
B
 MET 1ASN 357
C
 MET 1ASN 356
D
 MET 1ASN 357
E
 MET 1ASN 356
F
 MET 1ASN 357
G
 MET 1ASN 357
H
 MET 1ASN 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are133 helices in PDB entry 1V5B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 29Right-handed alpha
Helix 2
2
A
44 52Right-handed alpha
Helix 3
3
A
56 65Right-handed alpha
Helix 4
4
A
76 80Right-handed 310
Helix 5
5
A
87 99Right-handed alpha
Helix 6
6
A
121 126Right-handed alpha
Helix 7
7
A
139 143Right-handed 310
Helix 8
8
A
150 153Right-handed 310
Helix 9
9
A
164 180Right-handed alpha
Helix 10
10
A
194 208Right-handed alpha
Helix 11
11
A
221 231Right-handed alpha
Helix 12
12
A
232 235Right-handed 310
Helix 13
13
A
243 253Right-handed alpha
Helix 14
14
A
258 261Right-handed 310
Helix 15
15
A
282 286Right-handed 310
Helix 16
16
A
293 307Right-handed alpha
Helix 17
17
A
310 325Right-handed alpha
Helix 18
18
A
343 355Right-handed alpha
Helix 19
19
B
13 33Right-handed alpha
Helix 20
20
B
44 52Right-handed alpha
Helix 21
21
B
56 65Right-handed alpha
Helix 22
22
B
77 82Right-handed 310
Helix 23
23
B
87 99Right-handed alpha
Helix 24
24
B
114 118Right-handed 310
Helix 25
25
B
121 126Right-handed alpha
Helix 26
26
B
164 180Right-handed alpha
Helix 27
27
B
194 209Right-handed alpha
Helix 28
28
B
221 231Right-handed alpha
Helix 29
29
B
232 235Right-handed 310
Helix 30
30
B
241 253Right-handed alpha
Helix 31
31
B
293 308Right-handed alpha
Helix 32
32
B
310 328Right-handed alpha
Helix 33
33
B
343 355Right-handed alpha
Helix 34
34
C
13 30Right-handed alpha
Helix 35
35
C
43 50Right-handed alpha
Helix 36
36
C
56 65Right-handed alpha
Helix 37
37
C
76 80Right-handed 310
Helix 38
38
C
83 86Right-handed 310
Helix 39
39
C
87 98Right-handed alpha
Helix 40
40
C
111 115Right-handed 310
Helix 41
41
C
121 126Right-handed alpha
Helix 42
42
C
164 180Right-handed alpha
Helix 43
43
C
194 206Right-handed alpha
Helix 44
44
C
221 231Right-handed alpha
Helix 45
45
C
232 235Right-handed 310
Helix 46
46
C
241 255Right-handed alpha
Helix 47
47
C
282 286Right-handed 310
Helix 48
48
C
293 308Right-handed alpha
Helix 49
49
C
310 327Right-handed alpha
Helix 50
50
C
343 355Right-handed alpha
Helix 51
51
D
13 30Right-handed alpha
Helix 52
52
D
43 52Right-handed alpha
Helix 53
53
D
56 66Right-handed alpha
Helix 54
54
D
83 87Right-handed 310
Helix 55
55
D
89 100Right-handed alpha
Helix 56
56
D
111 118Right-handed 310
Helix 57
57
D
121 126Right-handed alpha
Helix 58
58
D
164 181Right-handed alpha
Helix 59
59
D
194 209Right-handed alpha
Helix 60
60
D
221 231Right-handed alpha
Helix 61
61
D
232 235Right-handed 310
Helix 62
62
D
241 257Right-handed alpha
Helix 63
63
D
282 286Right-handed 310
Helix 64
64
D
293 309Right-handed alpha
Helix 65
65
D
310 327Right-handed alpha
Helix 66
66
D
343 356Right-handed alpha
Helix 67
67
E
13 29Right-handed alpha
Helix 68
68
E
44 52Right-handed alpha
Helix 69
69
E
56 66Right-handed alpha
Helix 70
70
E
76 80Right-handed 310
Helix 71
71
E
87 99Right-handed alpha
Helix 72
72
E
114 118Right-handed 310
Helix 73
73
E
121 126Right-handed alpha
Helix 74
74
E
163 179Right-handed alpha
Helix 75
75
E
194 208Right-handed alpha
Helix 76
76
E
209 211Right-handed 310
Helix 77
77
E
221 231Right-handed alpha
Helix 78
78
E
232 235Right-handed 310
Helix 79
79
E
241 255Right-handed alpha
Helix 80
80
E
282 286Right-handed 310
Helix 81
81
E
293 308Right-handed alpha
Helix 82
82
E
310 327Right-handed alpha
Helix 83
83
E
343 355Right-handed alpha
Helix 84
84
F
13 31Right-handed alpha
Helix 85
85
F
43 52Right-handed alpha
Helix 86
86
F
56 66Right-handed alpha
Helix 87
87
F
83 87Right-handed 310
Helix 88
88
F
88 99Right-handed alpha
Helix 89
89
F
114 118Right-handed 310
Helix 90
90
F
121 126Right-handed alpha
Helix 91
91
F
138 143Right-handed alpha
Helix 92
92
F
164 180Right-handed alpha
Helix 93
93
F
194 208Right-handed alpha
Helix 94
94
F
221 231Right-handed alpha
Helix 95
95
F
232 235Right-handed 310
Helix 96
96
F
241 254Right-handed alpha
Helix 97
97
F
282 286Right-handed 310
Helix 98
98
F
293 307Right-handed alpha
Helix 99
99
F
310 327Right-handed alpha
Helix 100
100
F
343 356Right-handed alpha
Helix 101
101
G
13 29Right-handed alpha
Helix 102
102
G
44 52Right-handed alpha
Helix 103
103
G
56 65Right-handed alpha
Helix 104
104
G
76 80Right-handed 310
Helix 105
105
G
83 86Right-handed 310
Helix 106
106
G
87 99Right-handed alpha
Helix 107
107
G
111 115Right-handed 310
Helix 108
108
G
121 126Right-handed alpha
Helix 109
109
G
164 181Right-handed alpha
Helix 110
110
G
194 208Right-handed alpha
Helix 111
111
G
221 231Right-handed alpha
Helix 112
112
G
232 235Right-handed 310
Helix 113
113
G
241 253Right-handed alpha
Helix 114
114
G
282 286Right-handed 310
Helix 115
115
G
293 307Right-handed alpha
Helix 116
116
G
310 327Right-handed alpha
Helix 117
117
G
343 355Right-handed alpha
Helix 118
118
H
13 32Right-handed alpha
Helix 119
119
H
43 52Right-handed alpha
Helix 120
120
H
56 65Right-handed alpha
Helix 121
121
H
76 80Right-handed 310
Helix 122
122
H
83 86Right-handed 310
Helix 123
123
H
87 99Right-handed alpha
Helix 124
124
H
114 118Right-handed 310
Helix 125
125
H
121 126Right-handed alpha
Helix 126
126
H
164 180Right-handed alpha
Helix 127
127
H
194 209Right-handed alpha
Helix 128
128
H
221 231Right-handed alpha
Helix 129
129
H
232 235Right-handed 310
Helix 130
130
H
241 255Right-handed alpha
Helix 131
131
H
293 309Right-handed alpha
Helix 132
132
H
310 327Right-handed alpha
Helix 133
133
H
343 357Right-handed alpha
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There are 20 sheets in PDB entry 1V5B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
2 10parallel
Strand 3
A
68 73parallel
Strand 4
A
274 277parallel
Strand 5
A
263 267anti-parallel
Strand 6
A
103 109anti-parallel
Strand 7
A
129 135anti-parallel
Strand 8
A
237 240parallel
Strand 9
A
184 189parallel
Strand 10
A
215 220parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
155 163anti-parallel
Strand 3
B
155 163anti-parallel
Strand 4
B
147 148anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 330first strand
Strand 2
A
340 341parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 37first strand
Strand 2
B
2 10parallel
Strand 3
B
68 73parallel
Strand 4
B
273 277parallel
Strand 5
B
263 267anti-parallel
Strand 6
B
103 109anti-parallel
Strand 7
B
129 135anti-parallel
Strand 8
B
237 240parallel
Strand 9
B
184 189parallel
Strand 10
B
215 220parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 38first strand
Strand 2
C
2 10parallel
Strand 3
C
69 73parallel
Strand 4
C
273 277parallel
Strand 5
C
263 267anti-parallel
Strand 6
C
103 109anti-parallel
Strand 7
C
129 135anti-parallel
Strand 8
C
237 240parallel
Strand 9
C
184 189parallel
Strand 10
C
215 220parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 149first strand
Strand 2
C
155 163anti-parallel
Strand 3
D
155 163anti-parallel
Strand 4
D
147 149anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
329 330first strand
Strand 2
C
340 341parallel
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There are 10 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 40first strand
Strand 2
D
2 10parallel
Strand 3
D
68 73parallel
Strand 4
D
273 277parallel
Strand 5
D
263 267anti-parallel
Strand 6
D
103 109anti-parallel
Strand 7
D
129 135anti-parallel
Strand 8
D
237 240parallel
Strand 9
D
184 189parallel
Strand 10
D
215 220parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
329 330first strand
Strand 2
D
340 341parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
36 40first strand
Strand 2
E
3 10parallel
Strand 3
E
68 73parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
215 220first strand
Strand 2
E
184 189parallel
Strand 3
E
237 240parallel
Strand 4
E
129 135parallel
Strand 5
E
103 109anti-parallel
Strand 6
E
263 267anti-parallel
Strand 7
E
273 277anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 149first strand
Strand 2
E
155 162anti-parallel
Strand 3
F
156 163anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
329 330first strand
Strand 2
E
340 341parallel
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There are 10 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
36 38first strand
Strand 2
F
3 10parallel
Strand 3
F
68 73parallel
Strand 4
F
273 277parallel
Strand 5
F
263 267anti-parallel
Strand 6
F
103 109anti-parallel
Strand 7
F
129 135anti-parallel
Strand 8
F
237 240parallel
Strand 9
F
184 189parallel
Strand 10
F
215 220parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
329 330first strand
Strand 2
F
340 341parallel
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There are 10 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
35 40first strand
Strand 2
G
2 10parallel
Strand 3
G
68 73parallel
Strand 4
G
273 277parallel
Strand 5
G
263 267anti-parallel
Strand 6
G
103 109anti-parallel
Strand 7
G
129 135anti-parallel
Strand 8
G
237 240parallel
Strand 9
G
184 189parallel
Strand 10
G
215 220parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
147 148first strand
Strand 2
G
155 163anti-parallel
Strand 3
H
155 163anti-parallel
Strand 4
H
139 149anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
329 330first strand
Strand 2
G
340 341parallel
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There are 10 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
37 40first strand
Strand 2
H
4 10parallel
Strand 3
H
68 73parallel
Strand 4
H
273 277parallel
Strand 5
H
263 267anti-parallel
Strand 6
H
103 109anti-parallel
Strand 7
H
129 135anti-parallel
Strand 8
H
237 240parallel
Strand 9
H
184 189parallel
Strand 10
H
215 220parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
329 330first strand
Strand 2
H
340 341parallel
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