Analysis of interatomic Contacts of Structural Units in PDB entry:
1V6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V6S entry

There are 2 chains in PDB entry 1V6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 390
B
 MET 1GLY 390
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 1V6S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 7Right-handed 310
Helix 2
2
A
32 48Right-handed alpha
Helix 3
3
A
65 69Right-handed 310
Helix 4
4
A
70 81Right-handed alpha
Helix 5
5
A
93 102Right-handed alpha
Helix 6
6
A
113 117Right-handed 310
Helix 7
7
A
124 132Right-handed alpha
Helix 8
8
A
133 135Right-handed 310
Helix 9
9
A
142 146Right-handed 310
Helix 10
10
A
155 159Right-handed 310
Helix 11
11
A
165 177Right-handed alpha
Helix 12
12
A
194 197Right-handed 310
Helix 13
13
A
198 206Right-handed alpha
Helix 14
14
A
207 209Right-handed 310
Helix 15
15
A
218 226Right-handed alpha
Helix 16
16
A
236 238Right-handed 310
Helix 17
17
A
239 254Right-handed alpha
Helix 18
18
A
293 304Right-handed alpha
Helix 19
19
A
325 337Right-handed alpha
Helix 20
20
A
347 356Right-handed alpha
Helix 21
21
A
359 363Right-handed 310
Helix 22
22
A
371 380Right-handed alpha
Helix 23
23
A
382 387Right-handed alpha
Helix 24
24
B
3 7Right-handed 310
Helix 25
25
B
32 48Right-handed alpha
Helix 26
26
B
65 69Right-handed 310
Helix 27
27
B
70 79Right-handed alpha
Helix 28
28
B
93 102Right-handed alpha
Helix 29
29
B
113 117Right-handed 310
Helix 30
30
B
124 132Right-handed alpha
Helix 31
31
B
133 135Right-handed 310
Helix 32
32
B
142 146Right-handed 310
Helix 33
33
B
155 159Right-handed 310
Helix 34
34
B
165 178Right-handed alpha
Helix 35
35
B
194 197Right-handed 310
Helix 36
36
B
198 206Right-handed alpha
Helix 37
37
B
207 209Right-handed 310
Helix 38
38
B
217 226Right-handed alpha
Helix 39
39
B
236 238Right-handed 310
Helix 40
40
B
239 253Right-handed alpha
Helix 41
41
B
293 305Right-handed alpha
Helix 42
42
B
325 338Right-handed alpha
Helix 43
43
B
347 357Right-handed alpha
Helix 44
44
B
359 363Right-handed 310
Helix 45
45
B
372 380Right-handed alpha
Helix 46
46
B
382 387Right-handed alpha
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There are 8 sheets in PDB entry 1V6S. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
108 110parallel
Strand 3
A
51 55parallel
Strand 4
A
13 17parallel
Strand 5
A
137 140parallel
Strand 6
A
162 164parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
28 29anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 258first strand
Strand 2
A
211 214parallel
Strand 3
A
186 190parallel
Strand 4
A
309 313parallel
Strand 5
A
342 346parallel
Strand 6
A
365 366parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
276 279first strand
Strand 2
A
262 266anti-parallel
Strand 3
A
288 292anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 86first strand
Strand 2
B
108 110parallel
Strand 3
B
51 55parallel
Strand 4
B
13 17parallel
Strand 5
B
137 140parallel
Strand 6
B
162 164parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
28 29anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
256 258first strand
Strand 2
B
211 214parallel
Strand 3
B
186 190parallel
Strand 4
B
309 313parallel
Strand 5
B
342 346parallel
Strand 6
B
365 366parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
276 279first strand
Strand 2
B
262 266anti-parallel
Strand 3
B
288 292anti-parallel
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