Analysis of interatomic Contacts of Structural Units in PDB entry:
1V71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V71 entry

There is 1 chain in PDB entry 1V71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 6GLN 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1V71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 21Right-handed alpha
Helix 2
2
A
32 40Right-handed alpha
Helix 3
3
A
49 55Right-handed 310
Helix 4
4
A
56 66Right-handed alpha
Helix 5
5
A
69 76Right-handed alpha
Helix 6
6
A
83 96Right-handed alpha
Helix 7
7
A
109 119Right-handed alpha
Helix 8
8
A
132 145Right-handed alpha
Helix 9
9
A
154 162Right-handed alpha
Helix 10
10
A
162 173Right-handed alpha
Helix 11
11
A
185 199Right-handed alpha
Helix 12
12
A
213 222Right-handed alpha
Helix 13
13
A
243 254Right-handed alpha
Helix 14
14
A
261 276Right-handed alpha
Helix 15
15
A
281 284Right-handed 310
Helix 16
16
A
285 294Right-handed alpha
Helix 17
17
A
295 299Right-handed 310
Helix 18
18
A
313 322Right-handed alpha
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There are 2 sheets in PDB entry 1V71. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 30first strand
Strand 2
A
42 47anti-parallel
Strand 3
A
302 307parallel
Strand 4
A
177 181parallel
Strand 5
A
203 209parallel
Strand 6
A
256 260parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 79first strand
Strand 2
A
100 105parallel
Strand 3
A
122 126parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il