Analysis of interatomic Contacts of Structural Units in PDB entry:
1V77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V77 entry

There is 1 chain in PDB entry 1V77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7LYS 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1V77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 27Right-handed alpha
Helix 2
2
A
41 53Right-handed alpha
Helix 3
3
A
63 74Right-handed alpha
Helix 4
4
A
85 95Right-handed alpha
Helix 5
5
A
113 124Right-handed alpha
Helix 6
6
A
131 137Right-handed alpha
Helix 7
7
A
138 160Right-handed alpha
Helix 8
8
A
171 175Right-handed 310
Helix 9
9
A
177 188Right-handed alpha
Helix 10
10
A
191 198Right-handed alpha
Helix 11
11
A
200 208Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1V77.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
29 36parallel
Strand 3
A
55 60parallel
Strand 4
A
78 82parallel
Strand 5
A
99 101parallel
Strand 6
A
126 130parallel
Strand 7
A
163 166parallel
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