Analysis of interatomic Contacts of Structural Units in PDB entry:
1V7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V7L entry

There are 2 chains in PDB entry 1V7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 162
B
 MET 1ARG 163
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1V7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 20Right-handed alpha
Helix 2
2
A
29 37Right-handed alpha
Helix 3
3
A
44 49Right-handed alpha
Helix 4
4
A
68 78Right-handed alpha
Helix 5
5
A
88 99Right-handed alpha
Helix 6
6
A
138 147Right-handed alpha
Helix 7
7
A
149 157Right-handed alpha
Helix 8
8
B
15 20Right-handed alpha
Helix 9
9
B
29 37Right-handed alpha
Helix 10
10
B
44 49Right-handed alpha
Helix 11
11
B
68 77Right-handed alpha
Helix 12
12
B
88 99Right-handed alpha
Helix 13
13
B
138 148Right-handed alpha
Helix 14
14
B
149 158Right-handed alpha
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There are 2 sheets in PDB entry 1V7L. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 133first strand
Strand 2
A
124 127anti-parallel
Strand 3
A
115 119anti-parallel
Strand 4
A
2 9anti-parallel
Strand 5
A
54 56parallel
Strand 6
A
81 84parallel
Strand 7
A
102 104parallel
Strand 8
A
135 136anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 104first strand
Strand 2
B
81 84parallel
Strand 3
B
54 56parallel
Strand 4
B
2 9parallel
Strand 5
B
115 119anti-parallel
Strand 6
B
124 127anti-parallel
Strand 7
B
130 133anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il