Analysis of interatomic Contacts of Structural Units in PDB entry:
1V7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V7V entry

There is 1 chain in PDB entry 1V7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 801
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1V7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
159 165Right-handed alpha
Helix 2
2
A
166 171Right-handed alpha
Helix 3
3
A
213 218Right-handed alpha
Helix 4
4
A
226 232Right-handed alpha
Helix 5
5
A
271 280Right-handed alpha
Helix 6
6
A
282 302Right-handed alpha
Helix 7
7
A
310 318Right-handed alpha
Helix 8
8
A
319 332Right-handed alpha
Helix 9
9
A
348 355Right-handed alpha
Helix 10
10
A
362 376Right-handed alpha
Helix 11
11
A
388 393Right-handed 310
Helix 12
12
A
419 423Right-handed 310
Helix 13
13
A
426 443Right-handed alpha
Helix 14
14
A
444 449Right-handed 310
Helix 15
15
A
462 476Right-handed alpha
Helix 16
16
A
502 523Right-handed alpha
Helix 17
17
A
524 546Right-handed alpha
Helix 18
18
A
577 586Right-handed alpha
Helix 19
19
A
590 605Right-handed alpha
Helix 20
20
A
626 631Right-handed 310
Helix 21
21
A
645 656Right-handed alpha
Helix 22
22
A
658 670Right-handed alpha
Helix 23
23
A
671 675Right-handed 310
Helix 24
24
A
677 682Right-handed alpha
Helix 25
25
A
710 722Right-handed alpha
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There are 12 sheets in PDB entry 1V7V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
12 15anti-parallel
Strand 3
A
96 103anti-parallel
Strand 4
A
106 113anti-parallel
Strand 5
A
116 123anti-parallel
Strand 6
A
130 139anti-parallel
Strand 7
A
259 268anti-parallel
Strand 8
A
197 202anti-parallel
Strand 9
A
182 187anti-parallel
Strand 10
A
174 179anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
33 38anti-parallel
Strand 3
A
43 47anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
70 75anti-parallel
Strand 3
A
145 152anti-parallel
Strand 4
A
244 254anti-parallel
Strand 5
A
208 212anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 307first strand
Strand 2
A
745 752anti-parallel
Strand 3
A
755 762anti-parallel
Strand 4
A
793 800parallel
Strand 5
A
771 776anti-parallel
Strand 6
A
779 781anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 347first strand
Strand 2
A
386 387anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
451 453first strand
Strand 2
A
459 461anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 486first strand
Strand 2
A
495 501anti-parallel
Strand 3
A
557 558anti-parallel
Strand 4
A
564 565anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
553 554anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 576first strand
Strand 2
A
614 615anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
606 607first strand
Strand 2
A
610 611anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
641 642first strand
Strand 2
A
689 692anti-parallel
Strand 3
A
703 706anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
726 728first strand
Strand 2
A
733 735anti-parallel
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