Analysis of interatomic Contacts of Structural Units in PDB entry:
1V8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V8G entry

There are 2 chains in PDB entry 1V8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 329
B
 MET 1ALA 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 1V8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 9Right-handed alpha
Helix 2
2
A
14 27Right-handed alpha
Helix 3
3
A
31 46Right-handed alpha
Helix 4
4
A
48 62Right-handed alpha
Helix 5
5
A
88 100Right-handed alpha
Helix 6
6
A
117 125Right-handed alpha
Helix 7
7
A
132 144Right-handed alpha
Helix 8
8
A
150 154Right-handed alpha
Helix 9
9
A
155 159Right-handed 310
Helix 10
10
A
160 168Right-handed alpha
Helix 11
11
A
171 177Right-handed alpha
Helix 12
12
A
178 180Right-handed 310
Helix 13
13
A
194 196Right-handed 310
Helix 14
14
A
197 208Right-handed alpha
Helix 15
15
A
242 246Right-handed 310
Helix 16
16
A
251 256Right-handed 310
Helix 17
17
A
259 272Right-handed alpha
Helix 18
18
A
277 294Right-handed alpha
Helix 19
19
A
299 313Right-handed alpha
Helix 20
20
A
314 329Right-handed alpha
Helix 21
21
B
2 9Right-handed alpha
Helix 22
22
B
14 27Right-handed alpha
Helix 23
23
B
31 46Right-handed alpha
Helix 24
24
B
48 63Right-handed alpha
Helix 25
25
B
89 100Right-handed alpha
Helix 26
26
B
117 125Right-handed alpha
Helix 27
27
B
132 144Right-handed alpha
Helix 28
28
B
150 154Right-handed alpha
Helix 29
29
B
156 168Right-handed alpha
Helix 30
30
B
171 180Right-handed alpha
Helix 31
31
B
194 196Right-handed 310
Helix 32
32
B
197 208Right-handed alpha
Helix 33
33
B
242 246Right-handed 310
Helix 34
34
B
251 256Right-handed 310
Helix 35
35
B
259 272Right-handed alpha
Helix 36
36
B
277 294Right-handed alpha
Helix 37
37
B
299 314Right-handed alpha
Helix 38
38
B
314 327Right-handed alpha
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There are 2 sheets in PDB entry 1V8G. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
103 108parallel
Strand 3
A
73 78parallel
Strand 4
A
187 191parallel
Strand 5
A
211 217parallel
Strand 6
A
228 232anti-parallel
Strand 7
A
236 240anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
145 149first strand
Strand 2
B
103 108parallel
Strand 3
B
73 78parallel
Strand 4
B
187 191parallel
Strand 5
B
211 217parallel
Strand 6
B
228 232anti-parallel
Strand 7
B
237 240anti-parallel
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