Analysis of interatomic Contacts of Structural Units in PDB entry:
1V93


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V93 entry

There is 1 chain in PDB entry 1V93 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1V93. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 9Right-handed alpha
Helix 2
2
A
24 40Right-handed alpha
Helix 3
3
A
51 55Right-handed 310
Helix 4
4
A
56 70Right-handed alpha
Helix 5
5
A
84 98Right-handed alpha
Helix 6
6
A
126 139Right-handed alpha
Helix 7
7
A
140 142Right-handed 310
Helix 8
8
A
158 172Right-handed alpha
Helix 9
9
A
184 198Right-handed alpha
Helix 10
10
A
213 225Right-handed alpha
Helix 11
11
A
229 239Right-handed alpha
Helix 12
12
A
242 264Right-handed alpha
Helix 13
13
A
277 287Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1V93.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 19first strand
Strand 2
A
45 48parallel
Strand 3
A
74 78parallel
Strand 4
A
102 105parallel
Strand 5
A
143 148parallel
Strand 6
A
176 181parallel
Strand 7
A
204 208parallel
Strand 8
A
268 272parallel
Strand 9
A
14 19parallel
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