Analysis of interatomic Contacts of Structural Units in PDB entry:
1V9M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1V9M entry

There is 1 chain in PDB entry 1V9M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 5PRO 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 1V9M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 17Right-handed alpha
Helix 2
2
A
21 29Right-handed alpha
Helix 3
3
A
32 42Right-handed alpha
Helix 4
4
A
43 49Right-handed 310
Helix 5
5
A
53 69Right-handed alpha
Helix 6
6
A
71 76Right-handed alpha
Helix 7
7
A
77 105Right-handed alpha
Helix 8
8
A
108 112Right-handed 310
Helix 9
9
A
120 130Right-handed alpha
Helix 10
10
A
132 142Right-handed alpha
Helix 11
11
A
145 156Right-handed alpha
Helix 12
12
A
160 178Right-handed alpha
Helix 13
13
A
186 207Right-handed alpha
Helix 14
14
A
213 217Right-handed 310
Helix 15
15
A
226 235Right-handed alpha
Helix 16
16
A
237 243Right-handed 310
Helix 17
17
A
249 253Right-handed 310
Helix 18
18
A
257 274Right-handed alpha
Helix 19
19
A
275 279Right-handed 310
Helix 20
20
A
283 310Right-handed alpha
Helix 21
21
A
312 320Right-handed alpha
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There are no sheets in PDB entry 1V9M
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il