Analysis of interatomic Contacts of Structural Units in PDB entry:
1VE7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VE7 entry

There are 2 chains in PDB entry 1VE7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 9ARG 581
B
 PHE 9ARG 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1VE7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 22Right-handed alpha
Helix 2
2
A
239 243Right-handed 310
Helix 3
3
A
323 329Right-handed alpha
Helix 4
4
A
379 388Right-handed alpha
Helix 5
5
A
404 410Right-handed alpha
Helix 6
6
A
417 433Right-handed alpha
Helix 7
7
A
445 458Right-handed alpha
Helix 8
8
A
473 480Right-handed alpha
Helix 9
9
A
482 494Right-handed alpha
Helix 10
10
A
496 503Right-handed alpha
Helix 11
11
A
504 512Right-handed 310
Helix 12
12
A
528 542Right-handed alpha
Helix 13
13
A
560 580Right-handed alpha
Helix 14
14
B
10 22Right-handed alpha
Helix 15
15
B
238 244Right-handed alpha
Helix 16
16
B
323 328Right-handed alpha
Helix 17
17
B
379 388Right-handed alpha
Helix 18
18
B
404 410Right-handed alpha
Helix 19
19
B
417 433Right-handed alpha
Helix 20
20
B
445 458Right-handed alpha
Helix 21
21
B
473 481Right-handed alpha
Helix 22
22
B
482 494Right-handed alpha
Helix 23
23
B
496 503Right-handed alpha
Helix 24
24
B
504 512Right-handed 310
Helix 25
25
B
529 542Right-handed alpha
Helix 26
26
B
560 579Right-handed alpha
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There are 17 sheets in PDB entry 1VE7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 31first strand
Strand 2
A
35 41anti-parallel
Strand 3
A
46 51anti-parallel
Strand 4
A
56 58anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 67first strand
Strand 2
A
76 82anti-parallel
Strand 3
A
90 96anti-parallel
Strand 4
A
104 105anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
113 119parallel
Strand 3
A
124 129anti-parallel
Strand 4
A
134 140anti-parallel
Strand 5
A
143 150anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 160first strand
Strand 2
A
163 171anti-parallel
Strand 3
A
174 181anti-parallel
Strand 4
A
185 190anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 202first strand
Strand 2
A
208 214anti-parallel
Strand 3
A
218 223anti-parallel
Strand 4
A
230 232anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
247 253first strand
Strand 2
A
259 265anti-parallel
Strand 3
A
268 273anti-parallel
Strand 4
A
276 278anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
294 301anti-parallel
Strand 3
A
289 291anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 285first strand
Strand 2
A
294 301anti-parallel
Strand 3
A
304 311anti-parallel
Strand 4
A
316 318anti-parallel
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There are 16 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 339first strand
Strand 2
A
345 353anti-parallel
Strand 3
A
391 395anti-parallel
Strand 4
A
360 366parallel
Strand 5
A
436 444parallel
Strand 6
A
464 468parallel
Strand 7
A
516 521parallel
Strand 8
A
546 551parallel
Strand 9
B
546 551anti-parallel
Strand 10
B
516 521parallel
Strand 11
B
465 468parallel
Strand 12
B
436 444parallel
Strand 13
B
360 366parallel
Strand 14
B
391 395parallel
Strand 15
B
345 353anti-parallel
Strand 16
B
330 339anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 31first strand
Strand 2
B
35 41anti-parallel
Strand 3
B
46 51anti-parallel
Strand 4
B
56 58anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 67first strand
Strand 2
B
76 82anti-parallel
Strand 3
B
90 96anti-parallel
Strand 4
B
99 105anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 70first strand
Strand 2
B
113 119parallel
Strand 3
B
124 130anti-parallel
Strand 4
B
133 140anti-parallel
Strand 5
B
143 150anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
154 160first strand
Strand 2
B
163 171anti-parallel
Strand 3
B
174 181anti-parallel
Strand 4
B
185 190anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 202first strand
Strand 2
B
208 214anti-parallel
Strand 3
B
218 223anti-parallel
Strand 4
B
230 232anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 253first strand
Strand 2
B
259 265anti-parallel
Strand 3
B
268 273anti-parallel
Strand 4
B
276 278anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 285first strand
Strand 2
B
295 301anti-parallel
Strand 3
B
289 290anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
284 285first strand
Strand 2
B
295 301anti-parallel
Strand 3
B
304 311anti-parallel
Strand 4
B
316 318anti-parallel
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