Analysis of interatomic Contacts of Structural Units in PDB entry:
1VEC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VEC entry

There are 2 chains in PDB entry 1VEC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 83ASN 288
B
 LYS 83ASN 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1VEC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
86 90Right-handed 310
Helix 2
2
A
93 102Right-handed alpha
Helix 3
3
A
109 121Right-handed alpha
Helix 4
4
A
135 147Right-handed alpha
Helix 5
5
A
162 177Right-handed alpha
Helix 6
6
A
193 201Right-handed alpha
Helix 7
7
A
211 221Right-handed alpha
Helix 8
8
A
236 241Right-handed alpha
Helix 9
9
A
245 256Right-handed alpha
Helix 10
10
A
270 281Right-handed alpha
Helix 11
11
B
86 90Right-handed 310
Helix 12
12
B
93 104Right-handed alpha
Helix 13
13
B
109 114Right-handed alpha
Helix 14
14
B
115 122Right-handed alpha
Helix 15
15
B
135 147Right-handed alpha
Helix 16
16
B
162 177Right-handed alpha
Helix 17
17
B
178 181Right-handed 310
Helix 18
18
B
193 202Right-handed alpha
Helix 19
19
B
211 221Right-handed alpha
Helix 20
20
B
236 241Right-handed alpha
Helix 21
21
B
245 255Right-handed alpha
Helix 22
22
B
270 281Right-handed alpha
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There are 2 sheets in PDB entry 1VEC. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
207 210parallel
Strand 3
A
156 159parallel
Strand 4
A
231 235parallel
Strand 5
A
261 266parallel
Strand 6
A
125 128parallel
Strand 7
A
285 287parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 188first strand
Strand 2
B
207 210parallel
Strand 3
B
156 159parallel
Strand 4
B
231 235parallel
Strand 5
B
261 266parallel
Strand 6
B
125 128parallel
Strand 7
B
285 287parallel
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