Analysis of interatomic Contacts of Structural Units in PDB entry:
1VG4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VG4 entry

There are 2 chains in PDB entry 1VG4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 9PHE 288
B
 ASN 9PHE 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 1VG4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 27Right-handed alpha
Helix 2
2
A
29 34Right-handed alpha
Helix 3
3
A
42 56Right-handed alpha
Helix 4
4
A
63 86Right-handed alpha
Helix 5
5
A
95 100Right-handed alpha
Helix 6
6
A
100 123Right-handed alpha
Helix 7
7
A
125 148Right-handed alpha
Helix 8
8
A
155 167Right-handed alpha
Helix 9
9
A
167 181Right-handed alpha
Helix 10
10
A
186 210Right-handed alpha
Helix 11
11
A
229 239Right-handed alpha
Helix 12
12
A
239 246Right-handed alpha
Helix 13
13
A
247 249Right-handed 310
Helix 14
14
A
250 261Right-handed alpha
Helix 15
15
A
262 282Right-handed alpha
Helix 16
16
A
283 286Right-handed 310
Helix 17
17
B
9 26Right-handed alpha
Helix 18
18
B
29 36Right-handed alpha
Helix 19
19
B
42 55Right-handed alpha
Helix 20
20
B
60 85Right-handed alpha
Helix 21
21
B
95 100Right-handed alpha
Helix 22
22
B
100 122Right-handed alpha
Helix 23
23
B
128 149Right-handed alpha
Helix 24
24
B
155 167Right-handed alpha
Helix 25
25
B
167 181Right-handed alpha
Helix 26
26
B
187 210Right-handed alpha
Helix 27
27
B
229 239Right-handed alpha
Helix 28
28
B
239 248Right-handed alpha
Helix 29
29
B
251 262Right-handed alpha
Helix 30
30
B
262 282Right-handed alpha
Back to top of page
There are no sheets in PDB entry 1VG4
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il