Analysis of interatomic Contacts of Structural Units in PDB entry:
1VHU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VHU entry

There is 1 chain in PDB entry 1VHU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 8LEU 199
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1VHU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 31Right-handed 310
Helix 2
2
A
48 60Right-handed alpha
Helix 3
3
A
61 78Right-handed alpha
Helix 4
4
A
93 99Right-handed 310
Helix 5
5
A
116 138Right-handed alpha
Helix 6
6
A
155 170Right-handed alpha
Helix 7
7
A
184 199Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1VHU.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 16first strand
Strand 2
A
19 25anti-parallel
Strand 3
A
177 182parallel
Strand 4
A
141 144parallel
Strand 5
A
35 40parallel
Strand 6
A
102 107parallel
Strand 7
A
88 91anti-parallel
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