Analysis of interatomic Contacts of Structural Units in PDB entry:
1VLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VLV entry

There is 1 chain in PDB entry 1VLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -4LEU 313
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1VLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
17 38Right-handed alpha
Helix 3
3
A
57 71Right-handed alpha
Helix 4
4
A
90 100Right-handed alpha
Helix 5
5
A
111 123Right-handed alpha
Helix 6
6
A
135 151Right-handed alpha
Helix 7
7
A
166 179Right-handed alpha
Helix 8
8
A
188 192Right-handed 310
Helix 9
9
A
194 209Right-handed alpha
Helix 10
10
A
217 223Right-handed alpha
Helix 11
11
A
245 250Right-handed alpha
Helix 12
12
A
251 253Right-handed 310
Helix 13
13
A
255 261Right-handed alpha
Helix 14
14
A
282 287Right-handed alpha
Helix 15
15
A
292 313Right-handed alpha
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There are 2 sheets in PDB entry 1VLV. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 78first strand
Strand 2
A
48 53parallel
Strand 3
A
104 108parallel
Strand 4
A
126 128parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 215first strand
Strand 2
A
182 186parallel
Strand 3
A
157 161parallel
Strand 4
A
227 230parallel
Strand 5
A
268 271parallel
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