Analysis of interatomic Contacts of Structural Units in PDB entry:
1VP7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VP7 entry

There are 6 chains in PDB entry 1VP7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 13LEU 80
B
 GLN 10ASP 86
C
 PRO 9PRO 79
D
 ALA 13ALA 84
E
 ALA 13PRO 79
F
 ALA 13PRO 79
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1VP7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 36Right-handed alpha
Helix 2
2
A
40 78Right-handed alpha
Helix 3
3
B
19 35Right-handed alpha
Helix 4
4
B
40 78Right-handed alpha
Helix 5
5
B
79 81Right-handed 310
Helix 6
6
C
19 36Right-handed alpha
Helix 7
7
C
40 77Right-handed alpha
Helix 8
8
D
19 33Right-handed alpha
Helix 9
9
D
40 78Right-handed alpha
Helix 10
10
D
79 81Right-handed 310
Helix 11
11
E
19 36Right-handed alpha
Helix 12
12
E
40 78Right-handed alpha
Helix 13
13
F
19 36Right-handed alpha
Helix 14
14
F
40 78Right-handed alpha
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There are no sheets in PDB entry 1VP7
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