Analysis of interatomic Contacts of Structural Units in PDB entry:
1VRZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1VRZ entry

There are 7 chains in PDB entry 1VRZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 2GLY 2
A
ALA 4ALA 4
A
ALA 7ALA 7
A
ALA 10GLY 14
A
ALA 16LEU 17
A
ALA 19LEU 20
A
ALA 22ALA 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 1VRZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
2 12Right-handed 310
Helix 2
2
A
13 22Right-handed 310
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There are no sheets in PDB entry 1VRZ

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il