Analysis of interatomic Contacts of Structural Units in PDB entry:
1W1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1W1V entry

There are 2 chains in PDB entry 1W1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ALA 499
B
 THR 3ALA 499
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1W1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 19Right-handed alpha
Helix 2
2
A
32 36Right-handed 310
Helix 3
3
A
37 44Right-handed alpha
Helix 4
4
A
67 81Right-handed alpha
Helix 5
5
A
82 84Right-handed 310
Helix 6
6
A
96 101Right-handed alpha
Helix 7
7
A
106 114Right-handed alpha
Helix 8
8
A
116 135Right-handed alpha
Helix 9
9
A
147 149Right-handed 310
Helix 10
10
A
150 172Right-handed alpha
Helix 11
11
A
188 193Right-handed alpha
Helix 12
12
A
194 197Right-handed 310
Helix 13
13
A
198 204Right-handed alpha
Helix 14
14
A
241 246Right-handed 310
Helix 15
15
A
251 259Right-handed alpha
Helix 16
16
A
266 276Right-handed alpha
Helix 17
17
A
281 283Right-handed 310
Helix 18
18
A
328 334Right-handed alpha
Helix 19
19
A
342 350Right-handed alpha
Helix 20
20
A
381 395Right-handed alpha
Helix 21
21
A
404 408Right-handed 310
Helix 22
22
A
412 424Right-handed alpha
Helix 23
23
A
444 448Right-handed 310
Helix 24
24
B
14 20Right-handed alpha
Helix 25
25
B
32 36Right-handed 310
Helix 26
26
B
37 44Right-handed alpha
Helix 27
27
B
67 80Right-handed alpha
Helix 28
28
B
81 85Right-handed 310
Helix 29
29
B
96 101Right-handed alpha
Helix 30
30
B
106 114Right-handed alpha
Helix 31
31
B
116 135Right-handed alpha
Helix 32
32
B
149 172Right-handed alpha
Helix 33
33
B
188 193Right-handed alpha
Helix 34
34
B
194 197Right-handed 310
Helix 35
35
B
198 204Right-handed alpha
Helix 36
36
B
241 246Right-handed 310
Helix 37
37
B
251 259Right-handed alpha
Helix 38
38
B
266 276Right-handed alpha
Helix 39
39
B
281 283Right-handed 310
Helix 40
40
B
328 335Right-handed alpha
Helix 41
41
B
342 351Right-handed alpha
Helix 42
42
B
383 395Right-handed alpha
Helix 43
43
B
404 408Right-handed 310
Helix 44
44
B
412 424Right-handed alpha
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There are 6 sheets in PDB entry 1W1V. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 11 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 12first strand
Strand 2
A
399 403parallel
Strand 3
A
285 290parallel
Strand 4
A
208 212parallel
Strand 5
A
180 186parallel
Strand 6
A
138 142parallel
Strand 7
A
89 95parallel
Strand 8
A
46 54parallel
Strand 9
A
6 12parallel
Strand 10
A
399 403parallel
Strand 11
A
6 12parallel
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There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 341first strand
Strand 2
A
292 296anti-parallel
Strand 3
A
375 378anti-parallel
Strand 4
A
365 370anti-parallel
Strand 5
A
355 360anti-parallel
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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
467 470first strand
Strand 2
A
473 477anti-parallel
Strand 3
A
492 497anti-parallel
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There are 10 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 12first strand
Strand 2
B
399 403parallel
Strand 3
B
285 290parallel
Strand 4
B
208 212parallel
Strand 5
B
180 186parallel
Strand 6
B
138 142parallel
Strand 7
B
89 95parallel
Strand 8
B
46 54parallel
Strand 9
B
6 12parallel
Strand 10
B
6 12parallel
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There are 5 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
339 341first strand
Strand 2
B
292 297anti-parallel
Strand 3
B
375 378anti-parallel
Strand 4
B
365 370anti-parallel
Strand 5
B
356 360anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
467 470first strand
Strand 2
B
473 477anti-parallel
Strand 3
B
492 497anti-parallel
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