Analysis of interatomic Contacts of Structural Units in PDB entry:
1W1Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1W1Z entry

There are 2 chains in PDB entry 1W1Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 10ARG 328
B
 VAL 10ARG 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 1W1Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 17Right-handed 310
Helix 2
2
A
19 27Right-handed alpha
Helix 3
3
A
32 34Right-handed 310
Helix 4
4
A
63 76Right-handed alpha
Helix 5
5
A
94 99Right-handed 310
Helix 6
6
A
102 115Right-handed alpha
Helix 7
7
A
145 163Right-handed alpha
Helix 8
8
A
175 187Right-handed alpha
Helix 9
9
A
208 213Right-handed alpha
Helix 10
10
A
232 246Right-handed alpha
Helix 11
11
A
258 270Right-handed alpha
Helix 12
12
A
278 291Right-handed alpha
Helix 13
13
A
295 311Right-handed alpha
Helix 14
14
A
319 327Right-handed alpha
Helix 15
15
B
12 17Right-handed 310
Helix 16
16
B
19 27Right-handed alpha
Helix 17
17
B
32 34Right-handed 310
Helix 18
18
B
63 76Right-handed alpha
Helix 19
19
B
94 99Right-handed 310
Helix 20
20
B
102 115Right-handed alpha
Helix 21
21
B
126 130Right-handed 310
Helix 22
22
B
145 163Right-handed alpha
Helix 23
23
B
175 187Right-handed alpha
Helix 24
24
B
206 213Right-handed alpha
Helix 25
25
B
232 246Right-handed alpha
Helix 26
26
B
258 270Right-handed alpha
Helix 27
27
B
278 291Right-handed alpha
Helix 28
28
B
295 311Right-handed alpha
Helix 29
29
B
319 327Right-handed alpha
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There are 4 sheets in PDB entry 1W1Z. Click on sheet of interest to get list of strands forming it: AA, AB, BA, BB,

There are 12 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 43first strand
Strand 2
A
314 317parallel
Strand 3
A
273 277parallel
Strand 4
A
249 254parallel
Strand 5
A
193 196parallel
Strand 6
A
166 169parallel
Strand 7
A
119 124parallel
Strand 8
A
80 85parallel
Strand 9
A
36 43parallel
Strand 10
A
314 317parallel
Strand 11
A
273 277parallel
Strand 12
A
36 43first strand
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
A
143 144anti-parallel
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There are 11 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 43first strand
Strand 2
B
314 317parallel
Strand 3
B
273 277parallel
Strand 4
B
249 254parallel
Strand 5
B
193 196parallel
Strand 6
B
166 169parallel
Strand 7
B
119 124parallel
Strand 8
B
80 85parallel
Strand 9
B
36 43parallel
Strand 10
B
314 317parallel
Strand 11
B
36 43parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
137 138first strand
Strand 2
B
143 144anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il