Analysis of interatomic Contacts of Structural Units in PDB entry:
1W7U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1W7U entry

There are 12 chains in PDB entry 1W7U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2PHE 64
A
 VAL 68LEU 221
A
 PHE 223HIS 231
B
 LYS 3PHE 64
B
 VAL 68LEU 221
B
 PHE 223HIS 231
C
 SER 2PHE 64
C
 VAL 68LEU 221
C
 PHE 223HIS 231
D
 SER 2PHE 64
D
 VAL 68LEU 221
D
 PHE 223HIS 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1W7U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 9Right-handed 310
Helix 2
2
A
56 61Right-handed 310
Helix 3
3
A
68 72Right-handed 310
Helix 4
4
A
75 81Right-handed 310
Helix 5
5
A
82 87Right-handed alpha
Helix 6
6
A
156 159Right-handed 310
Helix 7
7
B
3 9Right-handed 310
Helix 8
8
B
56 61Right-handed 310
Helix 9
9
B
68 72Right-handed 310
Helix 10
10
B
75 81Right-handed 310
Helix 11
11
B
82 87Right-handed alpha
Helix 12
12
B
156 159Right-handed 310
Helix 13
13
C
3 9Right-handed 310
Helix 14
14
C
56 61Right-handed 310
Helix 15
15
C
68 72Right-handed 310
Helix 16
16
C
75 81Right-handed 310
Helix 17
17
C
82 87Right-handed alpha
Helix 18
18
C
156 159Right-handed 310
Helix 19
19
D
3 9Right-handed 310
Helix 20
20
D
56 61Right-handed 310
Helix 21
21
D
68 72Right-handed 310
Helix 22
22
D
75 81Right-handed 310
Helix 23
23
D
82 87Right-handed alpha
Helix 24
24
D
156 159Right-handed 310
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There are 4 sheets in PDB entry 1W7U. Click on sheet of interest to get list of strands forming it: AA, BA, CA, DA,

There are 13 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 22first strand
Strand 2
A
25 36anti-parallel
Strand 3
A
41 48anti-parallel
Strand 4
A
217 227anti-parallel
Strand 5
A
199 208anti-parallel
Strand 6
A
148 155anti-parallel
Strand 7
A
160 170anti-parallel
Strand 8
A
176 187anti-parallel
Strand 9
A
92 100anti-parallel
Strand 10
A
105 115anti-parallel
Strand 11
A
118 128anti-parallel
Strand 12
A
12 22parallel
Strand 13
A
12 22first strand
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There are 13 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 22first strand
Strand 2
B
25 36anti-parallel
Strand 3
B
41 48anti-parallel
Strand 4
B
217 227anti-parallel
Strand 5
B
199 208anti-parallel
Strand 6
B
148 155anti-parallel
Strand 7
B
160 170anti-parallel
Strand 8
B
176 187anti-parallel
Strand 9
B
92 100anti-parallel
Strand 10
B
105 115anti-parallel
Strand 11
B
118 128anti-parallel
Strand 12
B
12 22parallel
Strand 13
B
12 22first strand
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There are 22 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 22first strand
Strand 2
C
25 36anti-parallel
Strand 3
C
25 36first strand
Strand 4
C
12 22anti-parallel
Strand 5
C
41 48first strand
Strand 6
C
25 36anti-parallel
Strand 7
C
92 100first strand
Strand 8
C
105 115anti-parallel
Strand 9
C
105 115first strand
Strand 10
C
92 100anti-parallel
Strand 11
C
118 128first strand
Strand 12
C
12 22parallel
Strand 13
C
148 155first strand
Strand 14
C
199 208anti-parallel
Strand 15
C
160 170first strand
Strand 16
C
148 155anti-parallel
Strand 17
C
176 187first strand
Strand 18
C
92 100anti-parallel
Strand 19
C
199 208first strand
Strand 20
C
148 155anti-parallel
Strand 21
C
217 227first strand
Strand 22
C
41 48anti-parallel
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There are 22 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 22first strand
Strand 2
D
25 36anti-parallel
Strand 3
D
25 36first strand
Strand 4
D
12 22anti-parallel
Strand 5
D
41 48first strand
Strand 6
D
25 36anti-parallel
Strand 7
D
92 100first strand
Strand 8
D
105 115anti-parallel
Strand 9
D
105 115first strand
Strand 10
D
92 100anti-parallel
Strand 11
D
118 128first strand
Strand 12
D
12 22parallel
Strand 13
D
148 155first strand
Strand 14
D
199 208anti-parallel
Strand 15
D
160 170first strand
Strand 16
D
148 155anti-parallel
Strand 17
D
176 187first strand
Strand 18
D
92 100anti-parallel
Strand 19
D
199 208first strand
Strand 20
D
148 155anti-parallel
Strand 21
D
217 227first strand
Strand 22
D
41 48anti-parallel
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