Analysis of interatomic Contacts of Structural Units in PDB entry:
1W8T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1W8T entry

There is 1 chain in PDB entry 1W8T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2PRO 143
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 1W8T

There are 3 sheets in PDB entry 1W8T. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
125 133anti-parallel
Strand 3
A
36 41anti-parallel
Strand 4
A
28 33anti-parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 11first strand
Strand 2
A
125 133anti-parallel
Strand 3
A
62 69anti-parallel
Strand 4
A
94 103anti-parallel
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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
48 53anti-parallel
Strand 3
A
112 117anti-parallel
Strand 4
A
73 79anti-parallel
Strand 5
A
84 91anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il