Analysis of interatomic Contacts of Structural Units in PDB entry:
1W94


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1W94 entry

There are 2 chains in PDB entry 1W94 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0GLY 154
B
 MSE 1GLY 154
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1W94. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 25Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
100 108Right-handed alpha
Helix 4
4
B
10 25Right-handed alpha
Helix 5
5
B
35 44Right-handed alpha
Helix 6
6
B
100 108Right-handed alpha
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There are 3 sheets in PDB entry 1W94. Click on sheet of interest to get list of strands forming it: AA, BA, BB,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
2 5parallel
Strand 3
A
47 53parallel
Strand 4
A
56 63anti-parallel
Strand 5
A
69 79anti-parallel
Strand 6
A
141 153anti-parallel
Strand 7
A
130 135anti-parallel
Strand 8
A
119 123anti-parallel
Strand 9
A
92 93parallel
Strand 10
A
110 111parallel
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There are 8 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
2 5parallel
Strand 3
B
47 53parallel
Strand 4
B
56 63anti-parallel
Strand 5
B
69 79anti-parallel
Strand 6
B
141 153anti-parallel
Strand 7
B
130 135anti-parallel
Strand 8
B
119 123anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 93first strand
Strand 2
B
110 111parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il