Analysis of interatomic Contacts of Structural Units in PDB entry:
1WAJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WAJ entry

There is 1 chain in PDB entry 1WAJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 903
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 1WAJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 78Right-handed alpha
Helix 2
2
A
88 96Right-handed alpha
Helix 3
3
A
164 168Right-handed alpha
Helix 4
4
A
171 173Right-handed 310
Helix 5
5
A
180 183Right-handed alpha
Helix 6
6
A
194 207Right-handed alpha
Helix 7
7
A
222 234Right-handed alpha
Helix 8
8
A
236 242Right-handed alpha
Helix 9
9
A
273 280Right-handed alpha
Helix 10
10
A
290 298Right-handed alpha
Helix 11
11
A
312 338Right-handed alpha
Helix 12
12
A
340 351Right-handed alpha
Helix 13
13
A
355 359Right-handed 310
Helix 14
14
A
361 376Right-handed alpha
Helix 15
15
A
415 423Right-handed 310
Helix 16
16
A
439 442Right-handed alpha
Helix 17
17
A
470 502Right-handed alpha
Helix 18
18
A
524 529Right-handed alpha
Helix 19
19
A
537 570Right-handed alpha
Helix 20
20
A
580 608Right-handed alpha
Helix 21
21
A
630 636Right-handed alpha
Helix 22
22
A
638 640Right-handed 310
Helix 23
23
A
644 657Right-handed alpha
Helix 24
24
A
659 673Right-handed alpha
Helix 25
25
A
739 754Right-handed alpha
Helix 26
26
A
757 773Right-handed alpha
Helix 27
27
A
776 779Right-handed alpha
Helix 28
28
A
789 792Right-handed alpha
Helix 29
29
A
803 816Right-handed alpha
Helix 30
30
A
856 865Right-handed alpha
Helix 31
31
A
868 875Right-handed alpha
Helix 32
32
A
877 886Right-handed alpha
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There are 6 sheets in PDB entry 1WAJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 31first strand
Strand 2
A
15 20anti-parallel
Strand 3
A
4 7anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
57 61anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 214first strand
Strand 2
A
110 117parallel
Strand 3
A
133 140anti-parallel
Strand 4
A
145 151anti-parallel
Strand 5
A
186 191parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 252first strand
Strand 2
A
261 265anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 728first strand
Strand 2
A
708 715anti-parallel
Strand 3
A
683 689anti-parallel
Strand 4
A
407 412anti-parallel
Strand 5
A
624 628anti-parallel
Strand 6
A
617 621anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
700 704first strand
Strand 2
A
707 710anti-parallel
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