Analysis of interatomic Contacts of Structural Units in PDB entry:
1WAO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WAO entry

There are 4 chains in PDB entry 1WAO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 GLY 23MET 499
2
 GLY 23GLY 497
3
 GLY 23MET 499
4
 GLY 23LEU 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 1WAO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
1
24 29Right-handed alpha
Helix 2
2
1
43 58Right-handed alpha
Helix 3
3
1
61 75Right-handed alpha
Helix 4
4
1
77 91Right-handed alpha
Helix 5
5
1
95 110Right-handed alpha
Helix 6
6
1
111 126Right-handed alpha
Helix 7
7
1
131 149Right-handed alpha
Helix 8
8
1
181 185Right-handed 310
Helix 9
9
1
187 200Right-handed alpha
Helix 10
10
1
205 222Right-handed alpha
Helix 11
11
1
246 258Right-handed alpha
Helix 12
12
1
278 293Right-handed alpha
Helix 13
13
1
306 311Right-handed alpha
Helix 14
14
1
314 323Right-handed alpha
Helix 15
15
1
326 336Right-handed alpha
Helix 16
16
1
362 368Right-handed alpha
Helix 17
17
1
379 387Right-handed alpha
Helix 18
18
1
407 418Right-handed alpha
Helix 19
19
1
438 440Right-handed 310
Helix 20
20
1
491 496Right-handed alpha
Helix 21
21
2
25 41Right-handed alpha
Helix 22
22
2
43 58Right-handed alpha
Helix 23
23
2
61 75Right-handed alpha
Helix 24
24
2
77 91Right-handed alpha
Helix 25
25
2
95 110Right-handed alpha
Helix 26
26
2
111 126Right-handed alpha
Helix 27
27
2
131 149Right-handed alpha
Helix 28
28
2
187 200Right-handed alpha
Helix 29
29
2
205 222Right-handed alpha
Helix 30
30
2
246 257Right-handed alpha
Helix 31
31
2
278 293Right-handed alpha
Helix 32
32
2
306 314Right-handed alpha
Helix 33
33
2
314 323Right-handed alpha
Helix 34
34
2
326 336Right-handed alpha
Helix 35
35
2
362 368Right-handed alpha
Helix 36
36
2
379 387Right-handed alpha
Helix 37
37
2
407 418Right-handed alpha
Helix 38
38
2
438 440Right-handed 310
Helix 39
39
3
28 32Right-handed 310
Helix 40
40
3
35 42Right-handed 310
Helix 41
41
3
44 50Right-handed alpha
Helix 42
42
3
63 72Right-handed alpha
Helix 43
43
3
77 85Right-handed alpha
Helix 44
44
3
95 109Right-handed alpha
Helix 45
45
3
113 121Right-handed alpha
Helix 46
46
3
133 144Right-handed alpha
Helix 47
47
3
144 149Right-handed alpha
Helix 48
48
3
181 185Right-handed 310
Helix 49
49
3
187 200Right-handed alpha
Helix 50
50
3
205 222Right-handed alpha
Helix 51
51
3
246 257Right-handed alpha
Helix 52
52
3
278 293Right-handed alpha
Helix 53
53
3
306 314Right-handed alpha
Helix 54
54
3
314 323Right-handed alpha
Helix 55
55
3
326 336Right-handed alpha
Helix 56
56
3
362 368Right-handed alpha
Helix 57
57
3
379 387Right-handed alpha
Helix 58
58
3
407 418Right-handed alpha
Helix 59
59
3
438 440Right-handed 310
Helix 60
60
4
26 41Right-handed alpha
Helix 61
61
4
43 58Right-handed alpha
Helix 62
62
4
61 75Right-handed alpha
Helix 63
63
4
77 91Right-handed alpha
Helix 64
64
4
95 110Right-handed alpha
Helix 65
65
4
111 126Right-handed alpha
Helix 66
66
4
131 149Right-handed alpha
Helix 67
67
4
187 200Right-handed alpha
Helix 68
68
4
205 222Right-handed alpha
Helix 69
69
4
246 258Right-handed alpha
Helix 70
70
4
278 293Right-handed alpha
Helix 71
71
4
306 314Right-handed alpha
Helix 72
72
4
314 323Right-handed alpha
Helix 73
73
4
326 336Right-handed alpha
Helix 74
74
4
362 368Right-handed alpha
Helix 75
75
4
379 387Right-handed alpha
Helix 76
76
4
407 418Right-handed alpha
Helix 77
77
4
438 440Right-handed 310
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There are 12 sheets in PDB entry 1WAO. Click on sheet of interest to get list of strands forming it: 1A, 1B, 1C, 2A, 2B, 2C, 3A, 3B, 3C, 4A, 4B, 4C,

There are 10 strands in 1A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
226 229first strand
Strand 2
1
341 344parallel
Strand 3
1
348 350anti-parallel
Strand 4
1
422 425parallel
Strand 5
1
442 445parallel
Strand 6
1
432 437anti-parallel
Strand 7
1
458 465parallel
Strand 8
1
236 240anti-parallel
Strand 9
1
266 269parallel
Strand 10
1
297 300parallel
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There are 8 strands in 1B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
226 229first strand
Strand 2
1
341 344parallel
Strand 3
1
348 350anti-parallel
Strand 4
1
422 425parallel
Strand 5
1
442 445parallel
Strand 6
1
432 437anti-parallel
Strand 7
1
458 465parallel
Strand 8
1
468 476anti-parallel
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There are 3 strands in 1C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
388 389first strand
Strand 2
1
404 406parallel
Strand 3
1
396 397anti-parallel
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There are 6 strands in 2A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
226 229first strand
Strand 2
2
341 344parallel
Strand 3
2
348 350anti-parallel
Strand 4
2
422 425parallel
Strand 5
2
442 445parallel
Strand 6
2
434 437anti-parallel
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There are 5 strands in 2B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
297 299first strand
Strand 2
2
266 268parallel
Strand 3
2
236 240parallel
Strand 4
2
459 465anti-parallel
Strand 5
2
468 476anti-parallel
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There are 3 strands in 2C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
388 389first strand
Strand 2
2
404 406parallel
Strand 3
2
396 397anti-parallel
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There are 6 strands in 3A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
226 229first strand
Strand 2
3
341 344parallel
Strand 3
3
348 350anti-parallel
Strand 4
3
422 425parallel
Strand 5
3
442 445parallel
Strand 6
3
434 437anti-parallel
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There are 5 strands in 3B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
297 299first strand
Strand 2
3
266 268parallel
Strand 3
3
236 240parallel
Strand 4
3
459 465anti-parallel
Strand 5
3
472 476anti-parallel
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There are 3 strands in 3C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
388 389first strand
Strand 2
3
404 406parallel
Strand 3
3
396 397anti-parallel
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There are 6 strands in 4A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
226 229first strand
Strand 2
4
341 344parallel
Strand 3
4
348 350anti-parallel
Strand 4
4
422 425parallel
Strand 5
4
442 445parallel
Strand 6
4
434 437anti-parallel
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There are 5 strands in 4B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
297 299first strand
Strand 2
4
266 268parallel
Strand 3
4
236 240parallel
Strand 4
4
459 465anti-parallel
Strand 5
4
468 476anti-parallel
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There are 3 strands in 4C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
388 389first strand
Strand 2
4
404 406parallel
Strand 3
4
396 397anti-parallel
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