Analysis of interatomic Contacts of Structural Units in PDB entry:
1WCG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WCG entry

There are 2 chains in PDB entry 1WCG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 3PRO 464
B
 TYR 3PRO 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1WCG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 21Right-handed alpha
Helix 2
2
A
32 41Right-handed alpha
Helix 3
3
A
42 45Right-handed 310
Helix 4
4
A
56 72Right-handed alpha
Helix 5
5
A
81 86Right-handed alpha
Helix 6
6
A
95 112Right-handed alpha
Helix 7
7
A
126 132Right-handed alpha
Helix 8
8
A
133 138Right-handed 310
Helix 9
9
A
139 156Right-handed alpha
Helix 10
10
A
167 177Right-handed alpha
Helix 11
11
A
186 213Right-handed alpha
Helix 12
12
A
213 218Right-handed alpha
Helix 13
13
A
237 252Right-handed alpha
Helix 14
14
A
252 261Right-handed alpha
Helix 15
15
A
265 279Right-handed alpha
Helix 16
16
A
290 298Right-handed alpha
Helix 17
17
A
325 328Right-handed 310
Helix 18
18
A
335 339Right-handed 310
Helix 19
19
A
350 366Right-handed alpha
Helix 20
20
A
385 407Right-handed alpha
Helix 21
21
A
423 430Right-handed 310
Helix 22
22
A
449 462Right-handed alpha
Helix 23
23
B
16 21Right-handed alpha
Helix 24
24
B
32 41Right-handed alpha
Helix 25
25
B
42 45Right-handed 310
Helix 26
26
B
56 72Right-handed alpha
Helix 27
27
B
81 86Right-handed alpha
Helix 28
28
B
95 112Right-handed alpha
Helix 29
29
B
126 131Right-handed alpha
Helix 30
30
B
132 138Right-handed 310
Helix 31
31
B
139 156Right-handed alpha
Helix 32
32
B
167 177Right-handed alpha
Helix 33
33
B
186 213Right-handed alpha
Helix 34
34
B
213 218Right-handed alpha
Helix 35
35
B
237 252Right-handed alpha
Helix 36
36
B
252 261Right-handed alpha
Helix 37
37
B
265 279Right-handed alpha
Helix 38
38
B
290 298Right-handed alpha
Helix 39
39
B
325 328Right-handed 310
Helix 40
40
B
335 339Right-handed 310
Helix 41
41
B
350 366Right-handed alpha
Helix 42
42
B
385 405Right-handed alpha
Helix 43
43
B
423 430Right-handed 310
Helix 44
44
B
449 462Right-handed alpha
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There are 6 sheets in PDB entry 1WCG. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 10 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
410 416parallel
Strand 3
A
370 375parallel
Strand 4
A
304 307parallel
Strand 5
A
220 225parallel
Strand 6
A
161 166parallel
Strand 7
A
115 121parallel
Strand 8
A
75 79parallel
Strand 9
A
10 14parallel
Strand 10
A
10 14first strand
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 232first strand
Strand 2
A
311 316parallel
Strand 3
A
330 333anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
435 437first strand
Strand 2
A
446 448anti-parallel
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There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
410 416parallel
Strand 3
B
370 375parallel
Strand 4
B
304 307parallel
Strand 5
B
220 225parallel
Strand 6
B
161 166parallel
Strand 7
B
115 121parallel
Strand 8
B
75 79parallel
Strand 9
B
10 14parallel
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There are 3 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 232first strand
Strand 2
B
311 316parallel
Strand 3
B
330 333anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
435 437first strand
Strand 2
B
446 448anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il