Analysis of interatomic Contacts of Structural Units in PDB entry:
1WCS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WCS entry

There is 1 chain in PDB entry 1WCS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ASP 634
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 5 helices in PDB entry 1WCS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
123 127Right-handed 310
Helix 2
2
A
164 167Right-handed 310
Helix 3
3
A
375 398Right-handed alpha
Helix 4
4
A
479 483Right-handed 310
Helix 5
5
A
617 626Right-handed alpha
Back to top of page

There are 13 sheets in PDB entry 1WCS. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 14first strand
Strand 2
A
368 374anti-parallel
Strand 3
A
355 363anti-parallel
Strand 4
A
347 352anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 24first strand
Strand 2
A
30 33anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 46first strand
Strand 2
A
49 57anti-parallel
Strand 3
A
67 74anti-parallel
Strand 4
A
82 87anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 157first strand
Strand 2
A
133 146anti-parallel
Strand 3
A
109 117anti-parallel
Strand 4
A
97 106anti-parallel
Strand 5
A
184 185parallel
Back to list of sheets
Back to top of page

There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 157first strand
Strand 2
A
133 146anti-parallel
Strand 3
A
161 162anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 181first strand
Strand 2
A
194 202anti-parallel
Strand 3
A
187 188anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 181first strand
Strand 2
A
194 202anti-parallel
Strand 3
A
207 214anti-parallel
Strand 4
A
222 223anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 240first strand
Strand 2
A
243 250anti-parallel
Strand 3
A
257 260anti-parallel
Strand 4
A
268 269anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 298first strand
Strand 2
A
301 309anti-parallel
Strand 3
A
321 326anti-parallel
Strand 4
A
331 336anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 427first strand
Strand 2
A
604 612anti-parallel
Strand 3
A
456 458anti-parallel
Strand 4
A
452 453anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
423 427first strand
Strand 2
A
604 612anti-parallel
Strand 3
A
485 494anti-parallel
Strand 4
A
549 556anti-parallel
Strand 5
A
559 564anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
435 436anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 469first strand
Strand 2
A
587 591anti-parallel
Strand 3
A
501 508anti-parallel
Strand 4
A
516 523anti-parallel
Strand 5
A
527 532anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il