Analysis of interatomic Contacts of Structural Units in PDB entry:
1WCX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WCX entry

There is 1 chain in PDB entry 1WCX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8GLU 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 1WCX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 29Right-handed alpha
Helix 2
2
A
45 48Right-handed 310
Helix 3
3
A
49 58Right-handed alpha
Helix 4
4
A
67 81Right-handed alpha
Helix 5
5
A
85 92Right-handed alpha
Helix 6
6
A
98 108Right-handed alpha
Helix 7
7
A
119 124Right-handed alpha
Helix 8
8
A
125 127Right-handed 310
Helix 9
9
A
143 153Right-handed alpha
Helix 10
10
A
168 181Right-handed alpha
Helix 11
11
A
191 202Right-handed alpha
Helix 12
12
A
204 215Right-handed alpha
Helix 13
13
A
222 232Right-handed alpha
Helix 14
14
A
244 258Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1WCX. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
9 13parallel
Strand 3
A
186 189parallel
Strand 4
A
217 221parallel
Strand 5
A
238 240parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 43first strand
Strand 2
A
163 167anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
A
93 96parallel
Strand 3
A
62 65parallel
Strand 4
A
133 137parallel
Strand 5
A
156 160parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il