Analysis of interatomic Contacts of Structural Units in PDB entry:
1WIW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WIW entry

There are 2 chains in PDB entry 1WIW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLU 284
B
 MSE 1THR 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 25 helices in PDB entry 1WIW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed 310
Helix 2
2
A
16 24Right-handed alpha
Helix 3
3
A
47 55Right-handed alpha
Helix 4
4
A
109 122Right-handed alpha
Helix 5
5
A
124 140Right-handed alpha
Helix 6
6
A
147 150Right-handed 310
Helix 7
7
A
151 161Right-handed alpha
Helix 8
8
A
173 186Right-handed alpha
Helix 9
9
A
197 205Right-handed alpha
Helix 10
10
A
209 214Right-handed 310
Helix 11
11
A
224 235Right-handed alpha
Helix 12
12
A
250 274Right-handed alpha
Helix 13
13
B
6 11Right-handed 310
Helix 14
14
B
16 24Right-handed alpha
Helix 15
15
B
47 55Right-handed alpha
Helix 16
16
B
75 84Right-handed alpha
Helix 17
17
B
109 122Right-handed alpha
Helix 18
18
B
124 140Right-handed alpha
Helix 19
19
B
147 150Right-handed 310
Helix 20
20
B
151 161Right-handed alpha
Helix 21
21
B
173 186Right-handed alpha
Helix 22
22
B
197 205Right-handed alpha
Helix 23
23
B
224 235Right-handed alpha
Helix 24
24
B
250 273Right-handed alpha
Helix 25
25
B
283 289Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1WIW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 44first strand
Strand 2
A
64 69parallel
Strand 3
A
90 95parallel
Strand 4
A
102 103parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
164 168first strand
Strand 2
A
216 221parallel
Strand 3
A
240 244parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 45first strand
Strand 2
B
64 70parallel
Strand 3
B
90 95parallel
Strand 4
B
102 103parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 168first strand
Strand 2
B
216 221parallel
Strand 3
B
240 244parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il