Analysis of interatomic Contacts of Structural Units in PDB entry:
1WKC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WKC entry

There is 1 chain in PDB entry 1WKC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PRO 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1WKC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 16Right-handed alpha
Helix 2
2
A
18 38Right-handed alpha
Helix 3
3
A
56 61Right-handed alpha
Helix 4
4
A
99 103Right-handed 310
Helix 5
5
A
125 134Right-handed alpha
Helix 6
6
A
143 145Right-handed 310
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There are 2 sheets in PDB entry 1WKC. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
64 71anti-parallel
Strand 3
A
41 43parallel
Strand 4
A
105 108parallel
Strand 5
A
137 141parallel
Strand 6
A
162 165parallel
Strand 7
A
168 171anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
112 114anti-parallel
Strand 3
A
147 148parallel
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