Analysis of interatomic Contacts of Structural Units in PDB entry:
1WLE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WLE entry

There are 2 chains in PDB entry 1WLE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 24GLN 490
B
 GLN 22GLN 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 1WLE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 33Right-handed alpha
Helix 2
2
A
42 49Right-handed alpha
Helix 3
3
A
49 61Right-handed alpha
Helix 4
4
A
65 67Right-handed 310
Helix 5
5
A
68 108Right-handed alpha
Helix 6
6
A
111 114Right-handed 310
Helix 7
7
A
115 151Right-handed alpha
Helix 8
8
A
165 169Right-handed 310
Helix 9
9
A
187 195Right-handed alpha
Helix 10
10
A
216 236Right-handed alpha
Helix 11
11
A
248 256Right-handed alpha
Helix 12
12
A
282 292Right-handed alpha
Helix 13
13
A
299 301Right-handed 310
Helix 14
14
A
343 365Right-handed alpha
Helix 15
15
A
375 379Right-handed 310
Helix 16
16
A
410 417Right-handed alpha
Helix 17
17
A
440 452Right-handed alpha
Helix 18
18
A
461 463Right-handed 310
Helix 19
19
A
464 469Right-handed alpha
Helix 20
20
B
25 33Right-handed alpha
Helix 21
21
B
42 49Right-handed alpha
Helix 22
22
B
49 61Right-handed alpha
Helix 23
23
B
65 67Right-handed 310
Helix 24
24
B
68 97Right-handed alpha
Helix 25
25
B
97 102Right-handed alpha
Helix 26
26
B
111 115Right-handed 310
Helix 27
27
B
125 151Right-handed alpha
Helix 28
28
B
165 169Right-handed 310
Helix 29
29
B
187 195Right-handed alpha
Helix 30
30
B
216 236Right-handed alpha
Helix 31
31
B
248 256Right-handed alpha
Helix 32
32
B
282 292Right-handed alpha
Helix 33
33
B
299 301Right-handed 310
Helix 34
34
B
343 365Right-handed alpha
Helix 35
35
B
375 379Right-handed 310
Helix 36
36
B
410 417Right-handed alpha
Helix 37
37
B
440 452Right-handed alpha
Helix 38
38
B
461 463Right-handed 310
Helix 39
39
B
464 469Right-handed alpha
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There are 8 sheets in PDB entry 1WLE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 175first strand
Strand 2
A
369 373anti-parallel
Strand 3
A
385 393anti-parallel
Strand 4
A
398 407anti-parallel
Strand 5
A
431 439anti-parallel
Strand 6
A
330 340anti-parallel
Strand 7
A
303 312anti-parallel
Strand 8
A
239 242parallel
Strand 9
B
213 215anti-parallel
Strand 10
B
198 199anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
A
213 215anti-parallel
Strand 3
B
239 242anti-parallel
Strand 4
B
303 312parallel
Strand 5
B
330 340anti-parallel
Strand 6
B
431 439anti-parallel
Strand 7
B
398 407anti-parallel
Strand 8
B
385 393anti-parallel
Strand 9
B
369 373anti-parallel
Strand 10
B
170 175anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
278 279anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 429first strand
Strand 2
A
419 421anti-parallel
Strand 3
A
294 297parallel
Strand 4
B
482 483anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
458 459first strand
Strand 2
A
472 473anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
482 483first strand
Strand 2
B
294 297anti-parallel
Strand 3
B
419 421parallel
Strand 4
B
427 429anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
278 279anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
458 459first strand
Strand 2
B
472 473anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il