Analysis of interatomic Contacts of Structural Units in PDB entry:
1WLY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WLY entry

There is 1 chain in PDB entry 1WLY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2ALA 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1WLY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 14Right-handed 310
Helix 2
2
A
43 49Right-handed alpha
Helix 3
3
A
107 109Right-handed 310
Helix 4
4
A
119 139Right-handed alpha
Helix 5
5
A
158 169Right-handed alpha
Helix 6
6
A
179 190Right-handed alpha
Helix 7
7
A
201 211Right-handed alpha
Helix 8
8
A
226 233Right-handed alpha
Helix 9
9
A
254 259Right-handed alpha
Helix 10
10
A
271 276Right-handed 310
Helix 11
11
A
278 295Right-handed alpha
Helix 12
12
A
310 321Right-handed alpha
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There are 4 sheets in PDB entry 1WLY. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 7first strand
Strand 2
A
16 20anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 105first strand
Strand 2
A
30 40anti-parallel
Strand 3
A
67 75anti-parallel
Strand 4
A
87 90anti-parallel
Strand 5
A
110 111anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 105first strand
Strand 2
A
30 40anti-parallel
Strand 3
A
326 330anti-parallel
Strand 4
A
302 307parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 196first strand
Strand 2
A
172 177parallel
Strand 3
A
148 151parallel
Strand 4
A
215 220parallel
Strand 5
A
234 242parallel
Strand 6
A
266 268parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il