Analysis of interatomic Contacts of Structural Units in PDB entry:
1WMW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WMW entry

There are 4 chains in PDB entry 1WMW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 328
B
 VAL 2LEU 325
C
 MET 1ARG 328
D
 VAL 2LEU 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 70 helices in PDB entry 1WMW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 20Right-handed alpha
Helix 2
2
A
24 37Right-handed alpha
Helix 3
3
A
41 54Right-handed alpha
Helix 4
4
A
57 84Right-handed alpha
Helix 5
5
A
93 98Right-handed alpha
Helix 6
6
A
99 124Right-handed alpha
Helix 7
7
A
128 155Right-handed alpha
Helix 8
8
A
161 173Right-handed alpha
Helix 9
9
A
173 189Right-handed alpha
Helix 10
10
A
194 218Right-handed alpha
Helix 11
11
A
228 234Right-handed alpha
Helix 12
12
A
237 247Right-handed alpha
Helix 13
13
A
248 260Right-handed alpha
Helix 14
14
A
262 266Right-handed 310
Helix 15
15
A
267 281Right-handed alpha
Helix 16
16
A
281 304Right-handed alpha
Helix 17
17
A
305 309Right-handed 310
Helix 18
18
A
311 328Right-handed alpha
Helix 19
19
B
4 20Right-handed alpha
Helix 20
20
B
24 37Right-handed alpha
Helix 21
21
B
41 54Right-handed alpha
Helix 22
22
B
57 84Right-handed alpha
Helix 23
23
B
93 98Right-handed alpha
Helix 24
24
B
99 124Right-handed alpha
Helix 25
25
B
128 155Right-handed alpha
Helix 26
26
B
161 173Right-handed alpha
Helix 27
27
B
173 189Right-handed alpha
Helix 28
28
B
195 219Right-handed alpha
Helix 29
29
B
228 233Right-handed alpha
Helix 30
30
B
237 247Right-handed alpha
Helix 31
31
B
248 260Right-handed alpha
Helix 32
32
B
262 266Right-handed 310
Helix 33
33
B
267 280Right-handed alpha
Helix 34
34
B
281 308Right-handed alpha
Helix 35
35
B
311 325Right-handed alpha
Helix 36
36
C
4 20Right-handed alpha
Helix 37
37
C
24 37Right-handed alpha
Helix 38
38
C
41 55Right-handed alpha
Helix 39
39
C
57 84Right-handed alpha
Helix 40
40
C
93 98Right-handed alpha
Helix 41
41
C
99 124Right-handed alpha
Helix 42
42
C
128 155Right-handed alpha
Helix 43
43
C
161 173Right-handed alpha
Helix 44
44
C
173 189Right-handed alpha
Helix 45
45
C
194 218Right-handed alpha
Helix 46
46
C
228 233Right-handed alpha
Helix 47
47
C
237 247Right-handed alpha
Helix 48
48
C
248 261Right-handed alpha
Helix 49
49
C
262 266Right-handed 310
Helix 50
50
C
267 281Right-handed alpha
Helix 51
51
C
281 304Right-handed alpha
Helix 52
52
C
305 309Right-handed 310
Helix 53
53
C
311 328Right-handed alpha
Helix 54
54
D
4 20Right-handed alpha
Helix 55
55
D
24 33Right-handed alpha
Helix 56
56
D
41 55Right-handed alpha
Helix 57
57
D
57 84Right-handed alpha
Helix 58
58
D
93 98Right-handed alpha
Helix 59
59
D
99 124Right-handed alpha
Helix 60
60
D
128 155Right-handed alpha
Helix 61
61
D
161 173Right-handed alpha
Helix 62
62
D
173 179Right-handed alpha
Helix 63
63
D
179 189Right-handed alpha
Helix 64
64
D
195 219Right-handed alpha
Helix 65
65
D
237 247Right-handed alpha
Helix 66
66
D
248 260Right-handed alpha
Helix 67
67
D
262 266Right-handed 310
Helix 68
68
D
267 281Right-handed alpha
Helix 69
69
D
281 308Right-handed alpha
Helix 70
70
D
311 324Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1WMW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
91 92anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 88first strand
Strand 2
B
91 92anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 88first strand
Strand 2
C
91 92anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
87 88first strand
Strand 2
D
91 92anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il