Analysis of interatomic Contacts of Structural Units in PDB entry:
1WP9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WP9 entry

There are 6 chains in PDB entry 1WP9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 486
B
 MET 1GLN 487
C
 MET 1GLN 487
D
 MET 1ARG 486
E
 MET 1GLN 487
F
 MET 1GLN 487
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are143 helices in PDB entry 1WP9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 9Right-handed alpha
Helix 2
2
A
11 21Right-handed alpha
Helix 3
3
A
22 24Right-handed 310
Helix 4
4
A
35 51Right-handed alpha
Helix 5
5
A
61 76Right-handed alpha
Helix 6
6
A
79 81Right-handed 310
Helix 7
7
A
91 102Right-handed alpha
Helix 8
8
A
108 118Right-handed alpha
Helix 9
9
A
134 137Right-handed 310
Helix 10
10
A
141 154Right-handed alpha
Helix 11
11
A
169 180Right-handed alpha
Helix 12
12
A
195 199Right-handed 310
Helix 13
13
A
212 237Right-handed alpha
Helix 14
14
A
247 263Right-handed alpha
Helix 15
15
A
271 292Right-handed alpha
Helix 16
16
A
293 310Right-handed alpha
Helix 17
17
A
313 321Right-handed alpha
Helix 18
18
A
322 338Right-handed alpha
Helix 19
19
A
342 359Right-handed alpha
Helix 20
20
A
370 384Right-handed alpha
Helix 21
21
A
406 418Right-handed alpha
Helix 22
22
A
427 435Right-handed 310
Helix 23
23
A
447 458Right-handed alpha
Helix 24
24
A
476 485Right-handed alpha
Helix 25
25
B
4 9Right-handed alpha
Helix 26
26
B
11 22Right-handed alpha
Helix 27
27
B
35 51Right-handed alpha
Helix 28
28
B
61 76Right-handed alpha
Helix 29
29
B
79 81Right-handed 310
Helix 30
30
B
91 102Right-handed alpha
Helix 31
31
B
108 118Right-handed alpha
Helix 32
32
B
134 137Right-handed 310
Helix 33
33
B
141 154Right-handed alpha
Helix 34
34
B
169 181Right-handed alpha
Helix 35
35
B
195 199Right-handed 310
Helix 36
36
B
212 237Right-handed alpha
Helix 37
37
B
247 263Right-handed alpha
Helix 38
38
B
271 292Right-handed alpha
Helix 39
39
B
293 310Right-handed alpha
Helix 40
40
B
313 322Right-handed alpha
Helix 41
41
B
322 338Right-handed alpha
Helix 42
42
B
342 359Right-handed alpha
Helix 43
43
B
370 384Right-handed alpha
Helix 44
44
B
406 418Right-handed alpha
Helix 45
45
B
427 435Right-handed 310
Helix 46
46
B
447 458Right-handed alpha
Helix 47
47
B
476 485Right-handed alpha
Helix 48
48
C
4 9Right-handed alpha
Helix 49
49
C
11 21Right-handed alpha
Helix 50
50
C
22 24Right-handed 310
Helix 51
51
C
35 51Right-handed alpha
Helix 52
52
C
61 76Right-handed alpha
Helix 53
53
C
79 81Right-handed 310
Helix 54
54
C
91 102Right-handed alpha
Helix 55
55
C
108 118Right-handed alpha
Helix 56
56
C
134 137Right-handed 310
Helix 57
57
C
141 154Right-handed alpha
Helix 58
58
C
169 181Right-handed alpha
Helix 59
59
C
195 199Right-handed 310
Helix 60
60
C
212 237Right-handed alpha
Helix 61
61
C
247 263Right-handed alpha
Helix 62
62
C
267 270Right-handed 310
Helix 63
63
C
271 292Right-handed alpha
Helix 64
64
C
293 310Right-handed alpha
Helix 65
65
C
313 321Right-handed alpha
Helix 66
66
C
322 338Right-handed alpha
Helix 67
67
C
342 359Right-handed alpha
Helix 68
68
C
370 384Right-handed alpha
Helix 69
69
C
405 418Right-handed alpha
Helix 70
70
C
427 435Right-handed 310
Helix 71
71
C
447 458Right-handed alpha
Helix 72
72
C
477 484Right-handed alpha
Helix 73
73
D
4 9Right-handed alpha
Helix 74
74
D
11 21Right-handed alpha
Helix 75
75
D
22 24Right-handed 310
Helix 76
76
D
35 51Right-handed alpha
Helix 77
77
D
61 76Right-handed alpha
Helix 78
78
D
79 81Right-handed 310
Helix 79
79
D
91 102Right-handed alpha
Helix 80
80
D
108 118Right-handed alpha
Helix 81
81
D
134 137Right-handed 310
Helix 82
82
D
141 154Right-handed alpha
Helix 83
83
D
169 181Right-handed alpha
Helix 84
84
D
195 199Right-handed 310
Helix 85
85
D
212 237Right-handed alpha
Helix 86
86
D
247 263Right-handed alpha
Helix 87
87
D
271 292Right-handed alpha
Helix 88
88
D
293 310Right-handed alpha
Helix 89
89
D
314 321Right-handed alpha
Helix 90
90
D
322 338Right-handed alpha
Helix 91
91
D
342 359Right-handed alpha
Helix 92
92
D
370 384Right-handed alpha
Helix 93
93
D
406 418Right-handed alpha
Helix 94
94
D
426 435Right-handed 310
Helix 95
95
D
447 458Right-handed alpha
Helix 96
96
D
476 485Right-handed alpha
Helix 97
97
E
4 9Right-handed alpha
Helix 98
98
E
11 22Right-handed alpha
Helix 99
99
E
35 51Right-handed alpha
Helix 100
100
E
61 76Right-handed alpha
Helix 101
101
E
79 81Right-handed 310
Helix 102
102
E
91 102Right-handed alpha
Helix 103
103
E
108 118Right-handed alpha
Helix 104
104
E
134 137Right-handed 310
Helix 105
105
E
141 154Right-handed alpha
Helix 106
106
E
169 180Right-handed alpha
Helix 107
107
E
195 199Right-handed 310
Helix 108
108
E
212 237Right-handed alpha
Helix 109
109
E
247 263Right-handed alpha
Helix 110
110
E
271 292Right-handed alpha
Helix 111
111
E
293 310Right-handed alpha
Helix 112
112
E
313 321Right-handed alpha
Helix 113
113
E
322 338Right-handed alpha
Helix 114
114
E
342 359Right-handed alpha
Helix 115
115
E
370 383Right-handed alpha
Helix 116
116
E
406 418Right-handed alpha
Helix 117
117
E
427 435Right-handed 310
Helix 118
118
E
447 458Right-handed alpha
Helix 119
119
E
476 485Right-handed alpha
Helix 120
120
F
4 9Right-handed alpha
Helix 121
121
F
11 21Right-handed alpha
Helix 122
122
F
22 24Right-handed 310
Helix 123
123
F
35 51Right-handed alpha
Helix 124
124
F
61 76Right-handed alpha
Helix 125
125
F
79 81Right-handed 310
Helix 126
126
F
91 102Right-handed alpha
Helix 127
127
F
108 118Right-handed alpha
Helix 128
128
F
134 137Right-handed 310
Helix 129
129
F
141 154Right-handed alpha
Helix 130
130
F
169 181Right-handed alpha
Helix 131
131
F
195 199Right-handed 310
Helix 132
132
F
212 237Right-handed alpha
Helix 133
133
F
247 263Right-handed alpha
Helix 134
134
F
272 292Right-handed alpha
Helix 135
135
F
293 310Right-handed alpha
Helix 136
136
F
313 321Right-handed alpha
Helix 137
137
F
322 337Right-handed alpha
Helix 138
138
F
342 359Right-handed alpha
Helix 139
139
F
370 383Right-handed alpha
Helix 140
140
F
406 418Right-handed alpha
Helix 141
141
F
427 435Right-handed 310
Helix 142
142
F
447 458Right-handed alpha
Helix 143
143
F
476 485Right-handed alpha
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There are 12 sheets in PDB entry 1WP9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
104 107parallel
Strand 3
A
55 58parallel
Strand 4
A
128 132parallel
Strand 5
A
159 163parallel
Strand 6
A
26 29parallel
Strand 7
A
184 187parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 209first strand
Strand 2
A
467 473parallel
Strand 3
A
440 443parallel
Strand 4
A
364 367parallel
Strand 5
A
422 425parallel
Strand 6
A
388 391parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
104 107parallel
Strand 3
B
55 58parallel
Strand 4
B
128 132parallel
Strand 5
B
159 163parallel
Strand 6
B
26 29parallel
Strand 7
B
184 187parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 209first strand
Strand 2
B
467 473parallel
Strand 3
B
440 443parallel
Strand 4
B
364 367parallel
Strand 5
B
422 425parallel
Strand 6
B
388 391parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 86first strand
Strand 2
C
104 107parallel
Strand 3
C
55 58parallel
Strand 4
C
128 132parallel
Strand 5
C
159 163parallel
Strand 6
C
26 29parallel
Strand 7
C
184 187parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
204 209first strand
Strand 2
C
467 473parallel
Strand 3
C
440 443parallel
Strand 4
C
364 367parallel
Strand 5
C
422 425parallel
Strand 6
C
388 391parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 86first strand
Strand 2
D
104 107parallel
Strand 3
D
55 58parallel
Strand 4
D
128 132parallel
Strand 5
D
159 163parallel
Strand 6
D
26 29parallel
Strand 7
D
184 187parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
204 209first strand
Strand 2
D
467 473parallel
Strand 3
D
440 443parallel
Strand 4
D
364 367parallel
Strand 5
D
422 425parallel
Strand 6
D
388 390parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 86first strand
Strand 2
E
104 107parallel
Strand 3
E
55 58parallel
Strand 4
E
128 132parallel
Strand 5
E
159 163parallel
Strand 6
E
26 29parallel
Strand 7
E
184 187parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
204 209first strand
Strand 2
E
467 473parallel
Strand 3
E
440 443parallel
Strand 4
E
364 367parallel
Strand 5
E
422 425parallel
Strand 6
E
388 391parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
83 86first strand
Strand 2
F
104 107parallel
Strand 3
F
55 58parallel
Strand 4
F
128 132parallel
Strand 5
F
159 163parallel
Strand 6
F
26 29parallel
Strand 7
F
184 187parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
204 209first strand
Strand 2
F
467 473parallel
Strand 3
F
440 443parallel
Strand 4
F
364 367parallel
Strand 5
F
422 425parallel
Strand 6
F
388 391parallel
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