Analysis of interatomic Contacts of Structural Units in PDB entry:
1WPW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WPW entry

There are 2 chains in PDB entry 1WPW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1GLY 336
B
 GLY 1GLY 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 1WPW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 31Right-handed alpha
Helix 2
2
A
43 50Right-handed alpha
Helix 3
3
A
55 64Right-handed alpha
Helix 4
4
A
76 87Right-handed alpha
Helix 5
5
A
143 159Right-handed alpha
Helix 6
6
A
175 189Right-handed alpha
Helix 7
7
A
199 209Right-handed alpha
Helix 8
8
A
210 213Right-handed 310
Helix 9
9
A
219 235Right-handed alpha
Helix 10
10
A
236 239Right-handed 310
Helix 11
11
A
270 287Right-handed alpha
Helix 12
12
A
291 311Right-handed alpha
Helix 13
13
A
315 319Right-handed 310
Helix 14
14
A
323 334Right-handed alpha
Helix 15
15
B
12 31Right-handed alpha
Helix 16
16
B
43 50Right-handed alpha
Helix 17
17
B
55 65Right-handed alpha
Helix 18
18
B
76 88Right-handed alpha
Helix 19
19
B
143 159Right-handed alpha
Helix 20
20
B
175 189Right-handed alpha
Helix 21
21
B
199 209Right-handed alpha
Helix 22
22
B
210 213Right-handed 310
Helix 23
23
B
219 235Right-handed alpha
Helix 24
24
B
270 289Right-handed alpha
Helix 25
25
B
291 311Right-handed alpha
Helix 26
26
B
315 319Right-handed 310
Helix 27
27
B
323 334Right-handed alpha
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There are 3 sheets in PDB entry 1WPW. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
2 7parallel
Strand 3
A
67 70parallel
Strand 4
A
250 254parallel
Strand 5
A
241 245anti-parallel
Strand 6
A
92 98anti-parallel
Strand 7
A
111 117anti-parallel
Strand 8
A
215 218parallel
Strand 9
A
163 168parallel
Strand 10
A
193 198parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
134 142anti-parallel
Strand 3
B
134 142anti-parallel
Strand 4
B
127 131anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
35 40first strand
Strand 2
B
2 7parallel
Strand 3
B
67 70parallel
Strand 4
B
250 254parallel
Strand 5
B
241 245anti-parallel
Strand 6
B
92 98anti-parallel
Strand 7
B
111 117anti-parallel
Strand 8
B
215 218parallel
Strand 9
B
163 168parallel
Strand 10
B
193 198parallel
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