Analysis of interatomic Contacts of Structural Units in PDB entry:
1WQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WQ5 entry

There are 2 chains in PDB entry 1WQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 268
B
 MET 1001SER 1268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1WQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 14Right-handed alpha
Helix 2
2
A
29 43Right-handed alpha
Helix 3
3
A
69 74Right-handed alpha
Helix 4
4
A
77 92Right-handed alpha
Helix 5
5
A
102 110Right-handed alpha
Helix 6
6
A
110 121Right-handed alpha
Helix 7
7
A
132 135Right-handed 310
Helix 8
8
A
136 146Right-handed alpha
Helix 9
9
A
159 170Right-handed alpha
Helix 10
10
A
179 182Right-handed 310
Helix 11
11
A
192 203Right-handed alpha
Helix 12
12
A
216 226Right-handed alpha
Helix 13
13
A
234 244Right-handed alpha
Helix 14
14
A
247 265Right-handed alpha
Helix 15
15
B
1002 1015Right-handed alpha
Helix 16
16
B
1029 1044Right-handed alpha
Helix 17
17
B
1069 1073Right-handed 310
Helix 18
18
B
1077 1092Right-handed alpha
Helix 19
19
B
1102 1110Right-handed alpha
Helix 20
20
B
1110 1122Right-handed alpha
Helix 21
21
B
1132 1135Right-handed 310
Helix 22
22
B
1136 1146Right-handed alpha
Helix 23
23
B
1159 1170Right-handed alpha
Helix 24
24
B
1179 1182Right-handed 310
Helix 25
25
B
1192 1203Right-handed alpha
Helix 26
26
B
1216 1226Right-handed alpha
Helix 27
27
B
1234 1244Right-handed alpha
Helix 28
28
B
1247 1265Right-handed alpha
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There are 2 sheets in PDB entry 1WQ5. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
125 128parallel
Strand 3
A
97 101parallel
Strand 4
A
48 51parallel
Strand 5
A
18 24parallel
Strand 6
A
230 233parallel
Strand 7
A
208 211parallel
Strand 8
A
174 177parallel
Strand 9
A
153 154parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1149 1150first strand
Strand 2
B
1125 1128parallel
Strand 3
B
1097 1101parallel
Strand 4
B
1048 1051parallel
Strand 5
B
1018 1024parallel
Strand 6
B
1230 1233parallel
Strand 7
B
1208 1211parallel
Strand 8
B
1174 1177parallel
Strand 9
B
1153 1154parallel
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