Analysis of interatomic Contacts of Structural Units in PDB entry:
1WRB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WRB entry

There are 2 chains in PDB entry 1WRB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 164GLY 401
B
 SER 167ARG 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 1WRB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
186 190Right-handed 310
Helix 2
2
A
208 220Right-handed alpha
Helix 3
3
A
233 248Right-handed alpha
Helix 4
4
A
270 286Right-handed alpha
Helix 5
5
A
301 309Right-handed alpha
Helix 6
6
A
318 328Right-handed alpha
Helix 7
7
A
343 350Right-handed alpha
Helix 8
8
A
352 362Right-handed alpha
Helix 9
9
A
367 371Right-handed 310
Helix 10
10
A
381 392Right-handed alpha
Helix 11
11
B
186 190Right-handed 310
Helix 12
12
B
197 202Right-handed alpha
Helix 13
13
B
208 220Right-handed alpha
Helix 14
14
B
233 249Right-handed alpha
Helix 15
15
B
270 285Right-handed alpha
Helix 16
16
B
303 308Right-handed alpha
Helix 17
17
B
318 328Right-handed alpha
Helix 18
18
B
343 350Right-handed alpha
Helix 19
19
B
352 363Right-handed alpha
Helix 20
20
B
381 392Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 1WRB. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 173first strand
Strand 2
A
396 400anti-parallel
Strand 3
A
224 227parallel
Strand 4
A
372 377parallel
Strand 5
A
338 342parallel
Strand 6
A
264 267parallel
Strand 7
A
314 317parallel
Strand 8
A
292 295parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 173first strand
Strand 2
B
396 400anti-parallel
Strand 3
B
224 227parallel
Strand 4
B
372 376parallel
Strand 5
B
338 342parallel
Strand 6
B
264 267parallel
Strand 7
B
314 317parallel
Strand 8
B
292 295parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il