Analysis of interatomic Contacts of Structural Units in PDB entry:
1WRU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WRU entry

There is 1 chain in PDB entry 1WRU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3ASP 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1WRU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed 310
Helix 2
2
A
90 96Right-handed alpha
Helix 3
3
A
109 119Right-handed alpha
Helix 4
4
A
120 122Right-handed 310
Helix 5
5
A
131 136Right-handed alpha
Helix 6
6
A
148 159Right-handed alpha
Helix 7
7
A
168 170Right-handed 310
Helix 8
8
A
255 274Right-handed alpha
Helix 9
9
A
303 306Right-handed 310
Helix 10
10
A
337 340Right-handed 310
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There are 5 sheets in PDB entry 1WRU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 15first strand
Strand 2
A
5 9anti-parallel
Strand 3
A
53 58anti-parallel
Strand 4
A
61 75anti-parallel
Strand 5
A
80 88anti-parallel
Strand 6
A
32 39anti-parallel
Strand 7
A
19 25anti-parallel
Strand 8
A
312 322anti-parallel
Strand 9
A
297 302anti-parallel
Strand 10
A
326 335first strand
Strand 11
A
275 282anti-parallel
Strand 12
A
191 198anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 186first strand
Strand 2
A
297 302parallel
Strand 3
A
312 322anti-parallel
Strand 4
A
307 308first strand
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 108first strand
Strand 2
A
138 142anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
172 175parallel
Strand 3
A
163 166anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 236first strand
Strand 2
A
206 209anti-parallel
Strand 3
A
245 248parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il