Analysis of interatomic Contacts of Structural Units in PDB entry:
1WSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WSV entry

There are 2 chains in PDB entry 1WSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 4LEU 374
B
 VAL 4LEU 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1WSV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 17Right-handed alpha
Helix 2
2
A
36 47Right-handed alpha
Helix 3
3
A
65 72Right-handed alpha
Helix 4
4
A
120 137Right-handed alpha
Helix 5
5
A
158 165Right-handed alpha
Helix 6
6
A
170 174Right-handed 310
Helix 7
7
A
208 221Right-handed alpha
Helix 8
8
A
229 240Right-handed alpha
Helix 9
9
A
260 264Right-handed 310
Helix 10
10
A
265 272Right-handed alpha
Helix 11
11
A
276 285Right-handed alpha
Helix 12
12
A
340 342Right-handed 310
Helix 13
13
B
10 17Right-handed alpha
Helix 14
14
B
36 47Right-handed alpha
Helix 15
15
B
65 72Right-handed alpha
Helix 16
16
B
120 137Right-handed alpha
Helix 17
17
B
158 165Right-handed alpha
Helix 18
18
B
170 174Right-handed 310
Helix 19
19
B
208 221Right-handed alpha
Helix 20
20
B
229 240Right-handed alpha
Helix 21
21
B
260 264Right-handed 310
Helix 22
22
B
265 272Right-handed alpha
Helix 23
23
B
276 284Right-handed alpha
Helix 24
24
B
338 342Right-handed 310
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There are 8 sheets in PDB entry 1WSV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 24first strand
Strand 2
A
27 30anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
179 184first strand
Strand 2
A
187 193anti-parallel
Strand 3
A
202 207anti-parallel
Strand 4
A
150 155anti-parallel
Strand 5
A
48 52anti-parallel
Strand 6
A
225 227parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 92first strand
Strand 2
A
98 106anti-parallel
Strand 3
A
112 116anti-parallel
Strand 4
A
57 62anti-parallel
Strand 5
A
143 146anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 297first strand
Strand 2
A
330 338anti-parallel
Strand 3
A
315 325anti-parallel
Strand 4
A
307 309anti-parallel
Strand 5
A
347 351anti-parallel
Strand 6
A
356 362anti-parallel
Strand 7
A
290 297anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 24first strand
Strand 2
B
27 30anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
179 184first strand
Strand 2
B
187 193anti-parallel
Strand 3
B
202 207anti-parallel
Strand 4
B
150 155anti-parallel
Strand 5
B
49 52anti-parallel
Strand 6
B
226 227parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 92first strand
Strand 2
B
98 106anti-parallel
Strand 3
B
112 116anti-parallel
Strand 4
B
57 62anti-parallel
Strand 5
B
143 146anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
291 297first strand
Strand 2
B
330 337anti-parallel
Strand 3
B
315 325anti-parallel
Strand 4
B
307 309anti-parallel
Strand 5
B
347 352anti-parallel
Strand 6
B
355 362anti-parallel
Strand 7
B
291 297anti-parallel
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