Analysis of interatomic Contacts of Structural Units in PDB entry:
1WUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WUQ entry

There are 5 chains in PDB entry 1WUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 33ARG 216
B
 VAL 33ARG 216
C
 VAL 33ARG 216
D
 VAL 33ARG 216
E
 VAL 33ARG 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 1WUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 49Right-handed alpha
Helix 2
2
A
55 59Right-handed 310
Helix 3
3
A
60 73Right-handed alpha
Helix 4
4
A
74 78Right-handed 310
Helix 5
5
A
79 85Right-handed alpha
Helix 6
6
A
131 144Right-handed alpha
Helix 7
7
A
148 165Right-handed alpha
Helix 8
8
A
178 182Right-handed alpha
Helix 9
9
A
200 204Right-handed alpha
Helix 10
10
A
204 215Right-handed alpha
Helix 11
11
B
34 49Right-handed alpha
Helix 12
12
B
60 73Right-handed alpha
Helix 13
13
B
74 78Right-handed 310
Helix 14
14
B
79 85Right-handed alpha
Helix 15
15
B
131 144Right-handed alpha
Helix 16
16
B
148 165Right-handed alpha
Helix 17
17
B
178 182Right-handed alpha
Helix 18
18
B
200 204Right-handed alpha
Helix 19
19
B
204 216Right-handed alpha
Helix 20
20
C
34 49Right-handed alpha
Helix 21
21
C
55 59Right-handed 310
Helix 22
22
C
60 73Right-handed alpha
Helix 23
23
C
74 78Right-handed 310
Helix 24
24
C
79 85Right-handed alpha
Helix 25
25
C
131 144Right-handed alpha
Helix 26
26
C
148 165Right-handed alpha
Helix 27
27
C
179 181Right-handed 310
Helix 28
28
C
200 204Right-handed alpha
Helix 29
29
C
204 216Right-handed alpha
Helix 30
30
D
34 49Right-handed alpha
Helix 31
31
D
55 59Right-handed 310
Helix 32
32
D
60 73Right-handed alpha
Helix 33
33
D
74 78Right-handed 310
Helix 34
34
D
79 85Right-handed alpha
Helix 35
35
D
131 144Right-handed alpha
Helix 36
36
D
148 164Right-handed alpha
Helix 37
37
D
178 182Right-handed alpha
Helix 38
38
D
200 204Right-handed alpha
Helix 39
39
D
204 214Right-handed alpha
Helix 40
40
E
34 49Right-handed alpha
Helix 41
41
E
55 59Right-handed 310
Helix 42
42
E
60 73Right-handed alpha
Helix 43
43
E
74 78Right-handed 310
Helix 44
44
E
79 85Right-handed alpha
Helix 45
45
E
131 144Right-handed alpha
Helix 46
46
E
148 165Right-handed alpha
Helix 47
47
E
178 182Right-handed alpha
Helix 48
48
E
200 204Right-handed alpha
Helix 49
49
E
204 215Right-handed alpha
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There are 6 sheets in PDB entry 1WUQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
128 130anti-parallel
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There are 30 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 147first strand
Strand 2
A
97 108parallel
Strand 3
A
114 124anti-parallel
Strand 4
A
168 177anti-parallel
Strand 5
A
191 199anti-parallel
Strand 6
B
97 108anti-parallel
Strand 7
B
146 147parallel
Strand 8
B
97 108parallel
Strand 9
B
114 124anti-parallel
Strand 10
B
168 177anti-parallel
Strand 11
B
191 199anti-parallel
Strand 12
C
97 108anti-parallel
Strand 13
C
146 147parallel
Strand 14
C
97 108parallel
Strand 15
C
114 124anti-parallel
Strand 16
C
168 177anti-parallel
Strand 17
C
191 199anti-parallel
Strand 18
D
97 108anti-parallel
Strand 19
D
146 147parallel
Strand 20
D
97 108parallel
Strand 21
D
114 124anti-parallel
Strand 22
D
168 177anti-parallel
Strand 23
D
191 199anti-parallel
Strand 24
E
97 108anti-parallel
Strand 25
E
146 147parallel
Strand 26
E
97 108parallel
Strand 27
E
114 124anti-parallel
Strand 28
E
168 177anti-parallel
Strand 29
E
191 199anti-parallel
Strand 30
A
97 108anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 90first strand
Strand 2
B
128 130anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
88 90first strand
Strand 2
C
128 130anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
88 90first strand
Strand 2
D
128 130anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
88 90first strand
Strand 2
E
128 130anti-parallel
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