Analysis of interatomic Contacts of Structural Units in PDB entry:
1WV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WV2 entry

There are 2 chains in PDB entry 1WV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1009LYS 1251
B
 THR 2009LYS 2251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1WV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1031 1042Right-handed alpha
Helix 2
2
A
1052 1054Right-handed 310
Helix 3
3
A
1085 1098Right-handed alpha
Helix 4
4
A
1120 1133Right-handed alpha
Helix 5
5
A
1145 1155Right-handed alpha
Helix 6
6
A
1175 1186Right-handed alpha
Helix 7
7
A
1198 1209Right-handed alpha
Helix 8
8
A
1216 1221Right-handed alpha
Helix 9
9
A
1224 1246Right-handed alpha
Helix 10
10
B
2031 2042Right-handed alpha
Helix 11
11
B
2085 2098Right-handed alpha
Helix 12
12
B
2120 2133Right-handed alpha
Helix 13
13
B
2145 2155Right-handed alpha
Helix 14
14
B
2175 2186Right-handed alpha
Helix 15
15
B
2198 2209Right-handed alpha
Helix 16
16
B
2216 2221Right-handed alpha
Helix 17
17
B
2224 2246Right-handed alpha
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There are 8 sheets in PDB entry 1WV2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1011 1013first strand
Strand 2
A
1016 1018anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1022 1024first strand
Strand 2
A
1212 1215parallel
Strand 3
A
1191 1193parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1046 1050first strand
Strand 2
A
1075 1079parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1105 1108first strand
Strand 2
A
1137 1142parallel
Strand 3
A
1159 1162parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2011 2013first strand
Strand 2
B
2016 2018anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2022 2024first strand
Strand 2
B
2212 2215parallel
Strand 3
B
2191 2193parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2046 2050first strand
Strand 2
B
2075 2079parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2105 2108first strand
Strand 2
B
2137 2142parallel
Strand 3
B
2159 2162parallel
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