Analysis of interatomic Contacts of Structural Units in PDB entry:
1WVV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WVV entry

There are 2 chains in PDB entry 1WVV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 86CYS 294
B
 CYS 32CYS 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1WVV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
94 102Right-handed alpha
Helix 2
2
A
110 118Right-handed alpha
Helix 3
3
A
119 121Right-handed 310
Helix 4
4
A
129 149Right-handed alpha
Helix 5
5
A
158 166Right-handed 310
Helix 6
6
A
191 203Right-handed alpha
Helix 7
7
A
211 216Right-handed alpha
Helix 8
8
A
216 231Right-handed alpha
Helix 9
9
A
238 245Right-handed alpha
Helix 10
10
A
248 262Right-handed alpha
Helix 11
11
A
266 285Right-handed alpha
Helix 12
12
B
94 102Right-handed alpha
Helix 13
13
B
110 118Right-handed alpha
Helix 14
14
B
119 121Right-handed 310
Helix 15
15
B
129 149Right-handed alpha
Helix 16
16
B
158 166Right-handed 310
Helix 17
17
B
191 203Right-handed alpha
Helix 18
18
B
211 216Right-handed alpha
Helix 19
19
B
216 231Right-handed alpha
Helix 20
20
B
238 245Right-handed alpha
Helix 21
21
B
248 262Right-handed alpha
Helix 22
22
B
266 285Right-handed alpha
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There are 2 sheets in PDB entry 1WVV. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 42first strand
Strand 2
B
61 62anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
53 57anti-parallel
Strand 3
B
72 77anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il