Analysis of interatomic Contacts of Structural Units in PDB entry:
1WX5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1WX5 entry

There are 4 chains in PDB entry 1WX5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2HIS 276
B
 ALA 41PRO 122
C
 THR 2LEU 274
D
 ALA 41PRO 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1WX5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 29Right-handed alpha
Helix 2
2
A
29 45Right-handed alpha
Helix 3
3
A
58 76Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
121 125Right-handed 310
Helix 6
6
A
152 161Right-handed alpha
Helix 7
7
A
176 183Right-handed alpha
Helix 8
8
A
189 198Right-handed alpha
Helix 9
9
A
205 209Right-handed 310
Helix 10
10
A
210 230Right-handed alpha
Helix 11
11
A
258 262Right-handed 310
Helix 12
12
A
264 268Right-handed 310
Helix 13
13
B
103 116Right-handed alpha
Helix 14
14
C
6 10Right-handed 310
Helix 15
15
C
11 29Right-handed alpha
Helix 16
16
C
29 45Right-handed alpha
Helix 17
17
C
58 76Right-handed alpha
Helix 18
18
C
96 100Right-handed 310
Helix 19
19
C
121 125Right-handed 310
Helix 20
20
C
152 161Right-handed alpha
Helix 21
21
C
176 183Right-handed alpha
Helix 22
22
C
189 198Right-handed alpha
Helix 23
23
C
199 203Right-handed 310
Helix 24
24
C
205 209Right-handed 310
Helix 25
25
C
210 230Right-handed alpha
Helix 26
26
C
258 263Right-handed 310
Helix 27
27
C
264 268Right-handed 310
Helix 28
28
D
103 116Right-handed alpha
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There are 6 sheets in PDB entry 1WX5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
270 271parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 49first strand
Strand 2
B
52 57anti-parallel
Strand 3
B
73 76anti-parallel
Strand 4
B
79 80anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 85first strand
Strand 2
B
91 93anti-parallel
Strand 3
B
96 101anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 4first strand
Strand 2
C
270 271parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
45 49first strand
Strand 2
D
52 58anti-parallel
Strand 3
D
72 76anti-parallel
Strand 4
D
79 80anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 85first strand
Strand 2
D
91 93anti-parallel
Strand 3
D
96 101anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il